DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SERCA and JYalpha

DIOPT Version :9

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_001104092.2 Gene:JYalpha / 5740846 FlyBaseID:FBgn0267363 Length:1009 Species:Drosophila melanogaster


Alignment Length:1053 Identity:312/1053 - (29%)
Similarity:503/1053 - (47%) Gaps:143/1053 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DGHSKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLE-QFDDLLVKILL 66
            |.|...|::.|....|||..||:..:.|...:..|||.|..:.....|.:.|: .|...  .|||
  Fly    31 DNHKIPVDELLERLKTDPNMGLSFVEAKLRLEINGPNILTPQPPTPKWIVFLKTMFGGF--AILL 93

  Fly    67 LA----AIISFVLALFEEHEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMG 127
            .|    ..:.:::.|..:||.........:.:.:::|...:...:|...:.|.:::.|...|:..
  Fly    94 WAGSFLCFVGYLIQLQTQHEPPDDNLYLGIALTVLVIVTGLFTYFQVHKSSSIMDSFKNLVPQYA 158

  Fly   128 KVVRQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTD 192
            .|:|:.:  |..|.:.|||.||:|||..||::||||||...:.  |::|.|.|||||...::.|:
  Fly   159 TVIREGE--INTVTSDEIVKGDIVEVKFGDRVPADIRILEAHG--LKVDNSSLTGESEPQVRSTE 219

  Fly   193 AIPDPRAVNQDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDEFG 257
            ...:...   :.||:.|..|||..|..|||||.||.||.:|:|....:..:::::|:.:::..|.
  Fly   220 FTHENPL---ETKNLAFFSTNVLEGTCRGVVIATGDSTVMGRIANLAAGLDDVQSPISREIQLFI 281

  Fly   258 EQLSKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALG 322
            ..::....::.::.:||::      ..|..:|...::    .:.:.||.:||||...:|.||.|.
  Fly   282 RFITIFAIILGLSFFAISL------TLGYEFIDAVVF----LIGIIVANVPEGLLVTVTVCLTLT 336

  Fly   323 TRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFEMTGS 387
            .:|||.||.:|::|.:|||||.||.||||||||||.|:|:|:.:: :|::      .:|.:.|.|
  Fly   337 AKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLW-YDQI------IVESDTTES 394

  Fly   388 TYEPIGEVFLNGQRIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEKV--------GEATETA 444
                     ..|...|..| .:...|.....:||.:     |||...:.:        |.|:|.|
  Fly   395 ---------FRGSHFKIED-KSFNALFMCAALCNSA-----EFKGGQDDIPVFKKDVNGNASEAA 444

  Fly   445 LIVLAEKLNSFSVNKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTG 509
            |:...|.:                .|..|....|..|...:.|:...|...|      .....:.
  Fly   445 LLKFTETI----------------FAGIGAFRQKHIKLTEIPFNSTEKYQVS------VHEFNSS 487

  Fly   510 PKLFV---KGAPEGVLERCTHARVGTTKVPLTSALKAKI-LALTGQYGTGRDTLRCLALAVADSP 570
            ...|:   |||||.:|:||:...:....|.||..||.:. .|.....|.|.   |.|..|....|
  Fly   488 DGYFIVEMKGAPERILDRCSTIIIQGLSVELTPTLKLEFEEAYLEMGGMGE---RVLGFADLLLP 549

  Fly   571 MK--PDEMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAE 633
            |.  |...:.......:..| ||.|:|::.::||||..|.|::.:||:||:|||::|||:..||:
  Fly   550 MSKYPISYEFSADPPNFPLE-NLRFLGLISLIDPPRAAVPDAVAKCRSAGVRVIMVTGDHPITAK 613

  Fly   634 AICRRIGVF----AED--------------EDTTGKSYSGREFDDLSPTEQKAAV--ARSRLFSR 678
            ||.|.:|:.    |||              ...|.....|.|..::...|..|.:  ....:|:|
  Fly   614 AIARSVGIITTPTAEDIAKQRGVTVLDIDSRQATAIVVHGGELREMKAEELDAVIYYHNEIVFAR 678

  Fly   679 VEPQHKSKIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSS 742
            ..||.|..|||..|...||.|:|||||||:||||:|:||:||| ||:.|:|.||:|:|.||||:|
  Fly   679 TSPQQKLIIVEACQRRGEIVAVTGDGVNDSPALKRADIGVAMGISGSDVSKQAADMILLDDNFAS 743

  Fly   743 IVSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATAL 807
            ||..:||||.|::|:|:.|.|.::||:.|:|.........:|.||..:.:|.:::.||.|||.:|
  Fly   744 IVVGIEEGRIIFDNLKKSIAYTLTSNLPEIVPFLFFVIFDIPLALGTIAILCIDIGTDMLPAISL 808

  Fly   808 GFNPPDLDIMEKPPRKA-DEGLISGWL-FFRYMAIGFYVGAATVGAAAWWFVF----SDEGPKLS 866
            .:...:.|||.:.||.. ::.|::..| ...|:.||      .:...|.:|.|    ::.|...|
  Fly   809 AYEKAESDIMARMPRDPFEDRLVNKKLILMAYLQIG------VIQTVACFFTFFAIMAEHGFPPS 867

  Fly   867 Y-------WQLTHHLSCL--GGGDEFKGVDCKIFSDPHAMTMALSVLVTIEMLNAMNSLSENQSL 922
            .       |. :.::..|  |.|.|:...:.|:..........:|::|| ::.:.:...:...|:
  Fly   868 RLKGIREDWD-SKNVEDLEDGYGQEWTYRERKVLEYTAGTGFFVSIVVT-QVFDLLICKTRRNSI 930

  Fly   923 ITMPPWCNLWLIGSMALSF--TLHFVI----LYVDVLSTVFQVTPLSAEEWITVMKFSIPVVLLD 981
            :...       :|:..|:|  .|.|:|    .||.|.....::..:....||....|.:.:...|
  Fly   931 LQQG-------MGNHVLNFALVLEFIIACLLCYVPVFEKTLRMYSIKFIWWIYAFPFGLLIFFFD 988

  Fly   982 ETLKFVARKIADG 994
            |:.:|:.|:...|
  Fly   989 ESRRFLIRRNPGG 1001

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 309/1044 (30%)
JYalphaNP_001104092.2 ATPase-IIC_X-K 17..1009 CDD:273445 312/1053 (30%)
Cation_ATPase_N 29..102 CDD:214842 21/72 (29%)
E1-E2_ATPase 123..354 CDD:278548 75/247 (30%)
Cation_ATPase 416..509 CDD:289987 27/119 (23%)
COG4087 <673..738 CDD:226572 37/64 (58%)
Cation_ATPase_C 785..994 CDD:279079 49/223 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438598
Domainoid 1 1.000 48 1.000 Domainoid score I3472
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 282 1.000 Inparanoid score I96
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm51342
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.890

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