DRSC/TRiP Functional Genomics Resources

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Protein Alignment SERCA and atp13a3

DIOPT Version :9

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:XP_009304446.2 Gene:atp13a3 / 572029 ZFINID:ZDB-GENE-120521-1 Length:1225 Species:Danio rerio


Alignment Length:1183 Identity:238/1183 - (20%)
Similarity:433/1183 - (36%) Gaps:407/1183 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IKANQKKY-----GPNELPTEEGKSIWQLVLEQFDDLLVKILLLAAIISFVLALFEEHEETFTAF 88
            :..||::|     |.||:..:. .|:::|::::    ::....:..:.|.||...:|:.....|.
Zfish   178 LNKNQQEYRRFFFGLNEIDVKV-PSLFKLLIKE----VLNPFYIFQLFSVVLWCTDEYYYYAMAI 237

  Fly    89 VEPLVILLILIANAVVGVWQERNAESAIEALKEY---------EPEMGKVVRQDKSGIQKVRAKE 144
            |   |:..|.||.::..:            .|:|         ...:...|.:.:|..::..:.:
Zfish   238 V---VMSFISIATSLYTI------------KKQYVMLHDMVATHSTVRVTVCRGESETEEALSTD 287

  Fly   145 IVPGDLVEV-SVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDAIPDPR---------- 198
            :||||::.: |.|..:|.|..:  |..|.: :::|:||||||.|.| || :|:|.          
Zfish   288 LVPGDVIVIPSNGTIMPCDAVL--ICGTCI-VNESMLTGESVPVTK-TD-LPNPERDKKGSDGDQ 347

  Fly   199 --AVNQDKKNILFSGTNVAAGK------ARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDE 255
              :..:.|::.||.||||...:      .:.||:.||.|||.|::         |::.|..|..:
Zfish   348 IYSTEEHKRHTLFCGTNVIQTRYYTGEMVKAVVVRTGFSTAKGQL---------IRSILYPKPTD 403

  Fly   256 FGEQLSKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKI----------------AVALAV 304
            |.......:.::|:..                 :...::.:.:                ::.:..
Zfish   404 FKLYRDAYLFLLCLVA-----------------VASVVFIYSLVMKILNQEPVKEIIVKSLDIIT 451

  Fly   305 AAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIF 369
            ..:|..|||.:|..:....||:.|......|...:...|..:::|.|||||||.:.:.   |:..
Zfish   452 ITVPPALPAAMTAGIVYAQRRLRKVGIFSISPQRINICGQLNLVCFDKTGTLTEDGLD---MWGI 513

  Fly   370 DKVEGNDSSF-----------------------------LEFEMTG-----STYEPIGEVFLNGQ 400
            .:||  ||.|                             :|.:::|     ..:|..|.:.:...
Zfish   514 QRVE--DSRFQHSEERADDKSLVTSRFVSCMATCHSLTKIEGQLSGDPLDLKMFEATGWILVEAT 576

  Fly   401 RIKAADYDTLQ--------ELSTICIMCNDSAIDYNEFKQAFEKVGEATETALIVLAEKLNSFSV 457
            ..:.|.:|.::        :|....::..:..::.:|       :.|.:.:.:|.:..:. ||| 
Zfish   577 EEETAHHDRIELTYVKPPNQLLPPPVISPEQDMELSE-------LYELSASYMIGIVRQF-SFS- 632

  Fly   458 NKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTGPKLFVKGAPEGVL 522
              |.|.|.|..:...||                 :.|.:|                :|||||.|.
Zfish   633 --SALQRMSVVVRQIGE-----------------RRMDAY----------------LKGAPEVVA 662

  Fly   523 ERCTHARVGTTKVPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPMKPDEMDLGDSTKFY-- 585
            ..|....|...        .|::|....:.|     .|.:|||         ...|.....|:  
Zfish   663 SLCKKESVPED--------FAEVLEDYTKQG-----FRVIALA---------HRRLESKLTFHKV 705

  Fly   586 ------QYEVNLTFVGVVGMLDPPRKE---VFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGV 641
                  |.|.|:.|:|::.|.:..:.|   |.|.:   |.|.||.:::||||..||.::.|..|:
Zfish   706 QNINRDQIEKNMDFLGLIVMQNKLKTETPGVLDDL---RRANIRTVMVTGDNMLTAISVARDCGM 767

  Fly   642 --------------------------FAE-------------------------DEDTTGKSY-- 653
                                      :|:                         ||..:.:.|  
Zfish   768 IQPLDLVIIADAVPPKDGQAAKINWHYADKPSKHSNKPTKLEEVEIILEDGHSVDESRSQEQYHF 832

  Fly   654 --SGREF----DDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMTGDGVNDAPALK 712
              ||:.|    :......|| .|....:|:|:.|..|:::||.|:|::....|.|||.||..|||
Zfish   833 AMSGKSFAVIIEHFQDLLQK-LVLHGTVFARMAPDQKTQLVETLESVDYFVGMCGDGANDCGALK 896

  Fly   713 KAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEEGRA-------IYNNMKQF---------I 761
            :|..||::..  ..|..|:.......:.:.:.:.:.||||       ::..|..:         :
Zfish   897 RAHAGISLSE--LEASVASPFTSTTPSITCVPNLIREGRAALITSFCVFKFMALYSIIQCLSVAL 959

  Fly   762 RYLISSNIGEVVSIFLTAALGLPEALI----PVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPR 822
            .|.|.||:|:...:|:..|:.|   ||    .:...|..||.                  .:|| 
Zfish   960 LYSIGSNLGDFQFLFIDMAIIL---LIVFTMSLNSAWKELVA------------------RRPP- 1002

  Fly   823 KADEGLISGWLFFRYM-----AIGFYVGAATVGAAAWWFVFSDEGPKLSYWQLTHHL----SCLG 878
               .||:||.|.|..:     .:.|.:.|..:.....|:    ..|......|.||:    :..|
Zfish  1003 ---SGLVSGPLLFSVLTQILICLAFQIIAFLLIQRLDWY----SKPDFYNCSLPHHMNNYSNSTG 1060

  Fly   879 GGDEFKGVDCKIFSDPHAMTMALSVLVTIEMLNAMNS----LSENQSLIT-----------MPPW 928
            ..:|                         .::|.:|:    :|..|.||.           .|.:
Zfish  1061 TKEE-------------------------NIVNDVNTTLFFISSFQYLIVAIVFSKGKPFRQPSY 1100

  Fly   929 CNLW--LIGSMALSFTLHFVILYVDVLSTVFQ-----VTPLSAEEWITVMKFSIPVVLLDETLKF 986
            .| |  ::.::.|...:.|::.:  .:|.:::     ..|||   |    :.|:.:::|..|:..
Zfish  1101 KN-WPFVLSALILVIFMFFIMFF--PISGIYKFLELVCVPLS---W----RVSMVIIILANTIVS 1155

  Fly   987 VARKIADGESPIY 999
            |   |.:|...:|
Zfish  1156 V---IIEGGIDMY 1165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 235/1171 (20%)
atp13a3XP_009304446.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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