DRSC/TRiP Functional Genomics Resources

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Protein Alignment SERCA and ATP2B1

DIOPT Version :9

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_001353453.1 Gene:ATP2B1 / 490 HGNCID:814 Length:1249 Species:Homo sapiens


Alignment Length:1161 Identity:307/1161 - (26%)
Similarity:477/1161 - (41%) Gaps:325/1161 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TDPERGLTLD--QIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKILLLAAIISFVLALF-- 78
            |.|..||:.:  .::..:..:|.|.:|.::.|:..|||.|...|:.:.||.:|||:|..|:.:  
Human    65 TSPNEGLSGNPADLERREAVFGKNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIVSLGLSFYQP 129

  Fly    79 --------------EEHEETFTAFVEPLVILLILIANAVVGV---W----QERNAESAIEALKEY 122
                          ||..|..|.::|...|||.::...:|..   |    |.|..:|.||..:::
Human   130 PEGDNALCGEVSVGEEEGEGETGWIEGAAILLSVVCVVLVTAFNDWSKEKQFRGLQSRIEQEQKF 194

  Fly   123 EPEMGKVVRQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSV 187
            ....|..|.|       :...:|..||:.:|..||.:|||..:  |....|:||:|.|||||..|
Human   195 TVIRGGQVIQ-------IPVADITVGDIAQVKYGDLLPADGIL--IQGNDLKIDESSLTGESDHV 250

  Fly   188 IKHTDAIPDPRAVNQDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEM---SETEE----- 244
            .|           :.||..:|.|||:|..|..|.||...|:::..|.|.|.:   .|.||     
Human   251 KK-----------SLDKDPLLLSGTHVMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDEK 304

  Fly   245 -----------------------------------------------------IKTPLQQKLDEF 256
                                                                 .|:.||.||.:.
Human   305 KKEKKNKKQDGAIENRNKAKAQDGAAMEMQPLKSEEGGDGDEKDKKKANLPKKEKSVLQGKLTKL 369

  Fly   257 GEQLSK------VISVICVAVWAINIGHFNDPAHGGSWIK--------GAIY------YFKIAVA 301
            ..|:.|      .|:||.:.::.: |..|        |::        ..||      :|.|.|.
Human   370 AVQIGKAGLLMSAITVIILVLYFV-IDTF--------WVQKRPWLAECTPIYIQYFVKFFIIGVT 425

  Fly   302 LAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRM 366
            :.|.|:|||||..:|..||...::|.|.|.:||.|.:.||:|..:.||||||||||.|:|:|.:.
Human   426 VLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQA 490

  Fly   367 FIFDK-------VEGNDSSFLEFEMTGSTYEPIGEVFLNGQRIKAADYDTLQELSTICIMCNDSA 424
            :|.:|       .|....:.|.:.:||                          :|..|  ...|.
Human   491 YINEKHYKKVPEPEAIPPNILSYLVTG--------------------------ISVNC--AYTSK 527

  Fly   425 IDYNEFKQAFEK-VGEATETALIVLAEKLNSFSVNKSGLDRRSAAIACRGEI-ETKWKKEFTLEF 487
            |...|.:....: ||..||.||:.|.            ||.:......|.|| |....|.:|  |
Human   528 ILPPEKEGGLPRHVGNKTECALLGLL------------LDLKRDYQDVRNEIPEEALYKVYT--F 578

  Fly   488 SRDRKSMSSYCTPLKASRLGTGPKLFVKGAPEGVLERCTHARVGTTKVPLTSALKAKILALTGQY 552
            :..|||||   |.||.|  ....::|.|||.|.:|::|                 .|||:..|:.
Human   579 NSVRKSMS---TVLKNS--DGSYRIFSKGASEIILKKC-----------------FKILSANGEA 621

  Fly   553 GTGR-----------------DTLRCLALAVADSPMKPDEMDLGDSTKFYQYEVNLTFVGVVGML 600
            ...|                 :.||.:.||..|.|....|.:..:.....   ..||.:.|||:.
Human   622 KVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFPAGEPEPEWDNENDIV---TGLTCIAVVGIE 683

  Fly   601 DPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFAEDED---TTGKSYSGREFDDLS 662
            ||.|.||.|:|.:|:.|||.|.::||||..||.||..:.|:....||   ..||.::.|..::..
Human   684 DPVRPEVPDAIKKCQRAGITVRMVTGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKG 748

  Fly   663 PTEQK---AAVARSRLFSRVEPQHKSKIVE-----FLQSMNEISAMTGDGVNDAPALKKAEIGIA 719
            ..||:   ....:.|:.:|..|..|..:|:     .:....::.|:||||.||.||||||::|.|
Human   749 EIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTVSDQRQVVAVTGDGTNDGPALKKADVGFA 813

  Fly   720 MG-SGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGL 783
            || :||.|||.|::::|.||||:|||.||..||.:|:::.:|:::.::.|:..|:..|..|.:..
Human   814 MGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQ 878

  Fly   784 PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRKADEGLISGWLFFRYMAIGFYVGAAT 848
            ...|..||:|||||:.|.|.:.||...||...::.:.|...::.|||..:....:...||     
Human   879 DSPLKAVQMLWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFY----- 938

  Fly   849 VGAAAWWFVFSDEGPKLSYWQLTHHLSCLGGGDEFKGVDCKIFSDPHA-----MTMALSVLVTIE 908
                                ||....:.|..|::|..:|....:..||     .|:..:..|.::
Human   939 --------------------QLVVVFTLLFAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQ 983

  Fly   909 MLNAMNSLSEN------QSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTPLSAEEW 967
            :.|.:|:...:      :.:.....:|.: ::|:..:.      |:.|......|..:.||.|:|
Human   984 LFNEINARKIHGERNVFEGIFNNAIFCTI-VLGTFVVQ------IIIVQFGGKPFSCSELSIEQW 1041

  Fly   968 ITVMKFSIPVVLLDETLKFVARKIADGESPIYKMHGIVLMWAVFFG---LLYAMML 1020
                                                   :|::|.|   ||:..::
Human  1042 ---------------------------------------LWSIFLGMGTLLWGQLI 1058

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 302/1125 (27%)
ATP2B1NP_001353453.1 ATPase-IIB_Ca 15..1064 CDD:273668 307/1161 (26%)
ATP_Ca_trans_C 1103..1178 CDD:403580
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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