DRSC/TRiP Functional Genomics Resources

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Protein Alignment SERCA and SPoCk

DIOPT Version :9

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster


Alignment Length:1042 Identity:314/1042 - (30%)
Similarity:495/1042 - (47%) Gaps:192/1042 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKILLLAAIISFVLALFEEHEE 83
            |...||...:.|...|..|.|||........|:..:|||.:.|:.:||.:|::|.::..|::   
  Fly   126 DVRTGLKWTEAKYRAKIIGHNELLLVAEDPTWKKYIEQFRNPLILLLLGSALVSVIMKQFDD--- 187

  Fly    84 TFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVVRQDKSGIQKVRAKEIVPG 148
                .|...:.:||::..|.:   ||..:|.::|.||:..|.....:|:.:  :....|:|:|||
  Fly   188 ----AVSITIAILIVVTVAFI---QEYRSEKSLEELKKLVPPECHCLREGR--LDTFLARELVPG 243

  Fly   149 DLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDAIPDPRAV--NQDKKNILFSG 211
            |:|.::|||::|||:|:  ..:..|.||:|..|||:....|.||.:.:...|  :.:.|||.|.|
  Fly   244 DIVHLNVGDRVPADVRL--FEAVDLSIDESSFTGETEPARKITDVLLNNTNVKDHSNMKNIAFMG 306

  Fly   212 TNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLS----KVISVICVAVW 272
            |.|..|..:|:|:.||..:..|::...|...|..|||||:.:|..|.|||    .:|.||.:.  
  Fly   307 TLVRCGNGKGIVVSTGERSEFGEVFKMMQAEEAPKTPLQKSMDILGAQLSFYSFLIIGVIMLL-- 369

  Fly   273 AINIGHFNDPAHGGSWIKG--AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRS 335
                          .|::|  ....|.|:|:|||||||||||.|:|..||||..||||:|:||:.
  Fly   370 --------------GWLQGKPLSEMFNISVSLAVAAIPEGLPIVVTVTLALGVMRMAKRNSIVKK 420

  Fly   336 LPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFEMTGSTYEPIGEVFL--- 397
            ||:||||||.:|||||||||||.|:|:.:.:...|....        ::||:.|...||:.:   
  Fly   421 LPTVETLGCVNVICSDKTGTLTKNEMTATIIITSDGYMA--------DVTGAGYNDQGEIHIRHC 477

  Fly   398 NGQRIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEKVGEATETALIVLAEKLNSFSVNKSGL 462
            |...:...:...|.|:..:|         .|.:.|....:|:.||.||:.:|.|...::..::  
  Fly   478 NNVEMAKTNITNLLEIGAVC---------NNAYIQNGTLLGQPTEGALVAVAMKNGMYATAEN-- 531

  Fly   463 DRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTGPKLFVKGAPEGVLERCTH 527
                            :.:.....||.::|.|:..|  :...........|.|||.|.:|.:||.
  Fly   532 ----------------YVRIQEYPFSSEQKMMAVKC--IHKYNNNKEEIFFAKGALETLLPQCTK 578

  Fly   528 ARVGTTKVPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPMKPDEMDLGDSTKFYQYEVNLT 592
            .:.||..||||...:|:.||  ..|..||..||.||||...|..                  :|.
  Fly   579 YQFGTQTVPLTKQNEAEFLA--EAYEIGRKGLRVLALAKGRSMQ------------------DLI 623

  Fly   593 FVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAI--CRR----------------- 638
            :.|:||:.||||..|.:||.....:|:||.::|||.:.||.||  .||                 
  Fly   624 YCGLVGITDPPRPLVRESIEMLMQSGVRVKMVTGDAQETALAIDPSRRLQAVPTHAIPAWPTAGG 688

  Fly   639 ---------------------------------------IGVFAEDEDTT-GKSYSGREFDDLSP 663
                                                   ||:     ||. .::.||:|.|.::.
  Fly   689 VPLCSASACCSTNCLENAMKEIYLTALAQQGLPLVTANLIGI-----DTIHHQTLSGQEMDQMNE 748

  Fly   664 TEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVA 727
            .:.........:|.||.|:||.:||:.||....|..||||||||..|||||:|||||| :||.|.
  Fly   749 HQLDKVANNVSVFYRVSPRHKLEIVKSLQRSGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVC 813

  Fly   728 KSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQL 792
            |.||:|:|.:|:|.:|::|:|||:.|:.|::.|:|:.:|::|..:..|.|...:.:...|..:|:
  Fly   814 KEAADMILVNDDFHTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALALIALATLMDIANPLNAMQI 878

  Fly   793 LWVNLVTDGLPATALGFNPPDLDIMEKPPRKADEGLISGWLFFRYMAIGFYVGAATVGAAAWWFV 857
            ||:|::.||.||.:||..|.|.|::::.||...:.:|:     :.:.:...:.|:.:.....| |
  Fly   879 LWINIIMDGPPAQSLGVEPVDHDVLKQKPRNVKQPMIT-----KSVVVNVLLSASIIVLGTLW-V 937

  Fly   858 FSDEGPKLSYWQLTHHLSCLGGGDEFKGVDCKIFSDPHAMTMALSVLVTIEMLNAMNSLSENQSL 922
            |..|                       ..|..:.......||..:..|..:|.||::..|:.:|:
  Fly   938 FQRE-----------------------MADGTLGKTKRDTTMTFTCFVFFDMFNALSCRSQTKSV 979

  Fly   923 ITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTPLSAEEWITVMKFSIPVVLLDETLKFV 987
            .|:....|...:.::|.|.....:::|...|..|||...|:..:...::..:..|:::.|..|:.
  Fly   980 FTIGLTTNRMFLLAVAFSIIGQMLVVYFPPLQMVFQTEALTPYDIFFLVSLTSSVLVVSEIKKWF 1044

  Fly   988 AR 989
            .|
  Fly  1045 ER 1046

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 313/1040 (30%)
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 314/1042 (30%)
Cation_ATPase_N 112..179 CDD:279080 17/52 (33%)
E1-E2_ATPase 191..425 CDD:278548 95/256 (37%)
Cation_ATPase 496..579 CDD:289987 23/111 (21%)
COG4087 <760..823 CDD:226572 38/62 (61%)
Cation_ATPase_C 872..1044 CDD:279079 44/200 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438612
Domainoid 1 1.000 100 1.000 Domainoid score I354
eggNOG 1 0.900 - - E2759_KOG0202
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D100699at2759
OrthoFinder 1 1.000 - - FOG0000231
OrthoInspector 1 1.000 - - otm51342
orthoMCL 1 0.900 - - OOG6_100158
Panther 1 1.100 - - P PTHR42861
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.750

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