DRSC/TRiP Functional Genomics Resources

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Protein Alignment SERCA and atp1a1

DIOPT Version :9

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_989407.1 Gene:atp1a1 / 395044 XenbaseID:XB-GENE-484831 Length:1023 Species:Xenopus tropicalis


Alignment Length:1074 Identity:325/1074 - (30%)
Similarity:506/1074 - (47%) Gaps:179/1074 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDGHSKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKIL 65
            ||| |..::::....||||.:|||:..:......:.|||.|........|.....|.......:|
 Frog    41 MED-HKLSLDELHRKFGTDMQRGLSTARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLL 104

  Fly    66 LLAAIISFV---LALFEEHEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMG 127
            .:.||:.|:   :....|.|.|.......:|:..::|.......:||..:...:|:.|...|:..
 Frog   105 WIGAILCFLAYGITAATEEEPTNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 169

  Fly   128 KVVRQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTD 192
            .|:|..:.  ..:.|:::|.||||||..||:||||:||  |.:...::|.|.|||||....:   
 Frog   170 LVIRNGEK--LSINAEDVVLGDLVEVKGGDRIPADVRI--ISAHGCKVDNSSLTGESEPQTR--- 227

  Fly   193 AIPDPRAVNQ---DKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLD 254
               .|...|:   :.:||.|..||...|.|||||:.||..|.:|:|.|..|..|..:||:..:::
 Frog   228 ---SPDFTNENPLETRNIAFFSTNCVEGTARGVVVNTGDRTVMGRIATLASGLEGGRTPIAIEIE 289

  Fly   255 EFGEQLSKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCL 319
            .|...::.|...:.|:.:.:::      ....:|::..|:    .:.:.||.:||||.|.:|.||
 Frog   290 HFIHIITGVAVFLGVSFFILSL------ILQYTWLEAVIF----LIGIIVANVPEGLLATVTVCL 344

  Fly   320 ALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFEM 384
            .|..:|||:||.:|::|.:|||||.||.||||||||||.|:|:|:.|:..:::...|::      
 Frog   345 TLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTT------ 403

  Fly   385 TGSTYEPIGEVFLNGQRIKAADYD----TLQELSTICIMCNDSAIDYNEFKQAFEK---VGEATE 442
                           :....|.:|    |...||.:..:||.:.....:......|   .|:|:|
 Frog   404 ---------------ENQSGASFDKSSPTWTALSRVAGLCNRAVFQAGQENTPILKRDVAGDASE 453

  Fly   443 TALIVLAEKLNSFSVNKSGLDRRSAAIACRG---EIETKWKKEFTLEFSRDRK---SMSSYCTPL 501
            :||:...|                   .|.|   ::..|..|...:.|:...|   |:.....|.
 Frog   454 SALLKCIE-------------------LCCGSVRDMREKNPKVAEIPFNSTNKYQLSVHKNANPS 499

  Fly   502 KASRLGTGPKLFVKGAPEGVLERCTHARVGTTKVPLTSALKAKILALTGQY----GTGRDTLRCL 562
            ::..:     |.:|||||.:|:||:...:...:.||...||.   |....|    |.|...|...
 Frog   500 ESRYI-----LVMKGAPERILDRCSTIVLQGKEQPLDEELKD---AFQNAYLELGGLGERVLGFC 556

  Fly   563 ALAVADSPMKPDEMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGD 627
            .||::|... ||..........:..| ||.|||::.|:||||..|.|::.:||:|||:||::|||
 Frog   557 HLALSDDQF-PDGFQFDTEEVNFPTE-NLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGD 619

  Fly   628 NKATAEAICRRIGVFAEDEDTTGKSYSGR---EFDDLSPTEQKAAVARSR--------------- 674
            :..||:||.:.:|:.:|..:|. :..:.|   ..:.::|.:.||.|....               
 Frog   620 HPITAKAIAKGVGIISEGNETV-EDIAARLNIPVNQVNPRDAKACVIHGSDLKDMAQEQIDDILK 683

  Fly   675 -----LFSRVEPQHKSKIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAEM 733
                 :|:|..||.|..|||..|....|.|:|||||||:||||||:|||||| :|:.|:|.||:|
 Frog   684 HHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGIAMGIAGSDVSKQAADM 748

  Fly   734 VLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVS--IFLTAALGLPEALIPVQLLWVN 796
            :|.||||:|||:.|||||.|::|:|:.|.|.::|||.|:..  ||:.|.:.||  |..|.:|.::
 Frog   749 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIVANIPLP--LGTVTILCID 811

  Fly   797 LVTDGLPATALGFNPPDLDIMEKPPR--KAD----EGLISGWLFFRYMAIGFYVGAATVGAAAWW 855
            |.||.:||.:|.:...:.|||::.||  |.|    |.|||       ||.|.......:|....:
 Frog   812 LGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLIS-------MAYGQIGMIQALGGFFTY 869

  Fly   856 FVFSDEGPKLSYWQLTHHLSCLG----------------GGDEFKGVDCKI--FSDPHAMTMALS 902
            ||...|...|. |.|      ||                .|.::.....||  |:...|..:::.
 Frog   870 FVILAENGFLP-WTL------LGIRVNWDDRWNNDVEDSYGQQWTYEQRKIVEFTCHTAFFVSIV 927

  Fly   903 VLVTIEML---NAMNSL----SENQSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVT 960
            |:...:::   ...||:    .:|:.||       ..|....||:..|.    |...:....::.
 Frog   928 VVQWADLIICKTRRNSVFQQGMKNKILI-------FGLFEETALAAFLS----YCPGMDVALRMY 981

  Fly   961 PLSAEEWITVMKFSIPVVLLDETLKFVARKIADG 994
            ||....|.....:|:.:.:.||..|.:.|:...|
 Frog   982 PLKPTWWFCAFPYSLLIFIYDEVRKLIIRRSPGG 1015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 320/1063 (30%)
atp1a1NP_989407.1 ATPase-IIC_X-K 32..1023 CDD:273445 325/1074 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D100699at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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