DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SERCA and ATP7

DIOPT Version :9

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_001259466.1 Gene:ATP7 / 32142 FlyBaseID:FBgn0030343 Length:1254 Species:Drosophila melanogaster


Alignment Length:857 Identity:197/857 - (22%)
Similarity:335/857 - (39%) Gaps:246/857 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 DLLVKILL-------LAAIISFVLALFEEHEETFTAFVEPLVILLILIANAVVGVWQERNAE--- 113
            |:|:.::.       :|.:|:.|  |.|::....|.|..| .:|||.|:   :|.|.|..|:   
  Fly   450 DVLISMVTTISYVYSVAVVIAAV--LLEQNSSPLTFFDTP-PMLLIFIS---LGRWLEHIAKGKT 508

  Fly   114 ----SAIEALK-------EYEPEMG----KVVRQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADI 163
                |.:.:||       |..|:..    ||:..|.  :|:        ||:::|..|.|:|.|.
  Fly   509 SEALSKLLSLKAADALLVEISPDFDIISEKVISVDY--VQR--------GDILKVIPGAKVPVDG 563

  Fly   164 RITHIYSTTLRIDQSILTGESVSVIKHTDAIPDPRAVNQDKKNILFSGTNVAAGKARGVVI---- 224
            ::.:.:|:   .|:|::||||:.|.|...::....::||:                 ||::    
  Fly   564 KVLYGHSS---CDESLITGESMPVAKRKGSVVIGGSINQN-----------------GVLLVEAT 608

  Fly   225 GTGLSTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSK---VISVICVAVWAINIGHFNDP---- 282
            .||.:|.:.:|...:.|.:..|.|:||..|........   |:|.|.:..|.| || |::|    
  Fly   609 HTGENTTLAQIVRLVEEAQTSKAPIQQLADRIAGYFVPFVVVVSSITLIAWII-IG-FSNPNLVP 671

  Fly   283 ---AHGGSWIKGAI---YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVET 341
               .|.....:..|   |.||.|:::...|.|..|.....|.:.:.|...|....:|:...::|.
  Fly   672 VAMEHKMHMDQNTIIVSYAFKCALSVLAIACPCALGLATPTAVMVATGTGAINGVLVKGATALEN 736

  Fly   342 LGCTSVICSDKTGTLTTNQMSVSRMFIF---------------DKVEGND-----SSFLEF--EM 384
            ......:..|||||:|......|::.:|               ...|.|.     |:.:.|  :|
  Fly   737 AHKVKTVVFDKTGTITHGTPMTSKVTLFVTAQVCSLARALTIVGAAEQNSEHPIASAIVHFAKDM 801

  Fly   385 TGSTYEPIGEVFLN----------GQRIKAADYD-TLQELSTICIMCN-DSAIDYNEFKQAFEKV 437
            ......|....|..          |.|:..::|: ||::      .|| |..|:|....:...:.
  Fly   802 LNVGATPQAGSFGKSSHFQAVPGCGIRVTVSNYEQTLRQ------ACNADRIINYENLHRTHPQG 860

  Fly   438 GEATETALIVLAEKLNSFSVNKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLK 502
            ....:....: ...|...||.|| ::..:..:.....:|.:      .|...|:|.:.|      
  Fly   861 SVPVDNGASI-EHLLPQRSVRKS-MELNNQQLLSDLVLEPE------EELLTDQKIIDS------ 911

  Fly   503 ASRLGTGPKLFV---------KGAPEGVLE--RC-TH-ARVGTTKVPLTSALKAKILALTGQYGT 554
                   |::.|         :.|.|..||  .| || .|.|.|.|         :.||.||   
  Fly   912 -------PEILVLIGNREWMERNAIEVPLEISDCMTHEERKGHTAV---------LCALNGQ--- 957

  Fly   555 GRDTLRCLALAVADSPMKPDEMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGI 619
                |.|: .||:|. :||              |.:|                  ::...:..||
  Fly   958 ----LVCM-FAVSDM-VKP--------------EAHL------------------AVYTLKRMGI 984

  Fly   620 RVIVITGDNKATAEAICRRIGVFAEDEDTTGKSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHK 684
            .|:::|||||.||.:|.|.:|:                               ..:::.|.|.||
  Fly   985 DVVLLTGDNKNTAASIAREVGI-------------------------------RTVYAEVLPSHK 1018

  Fly   685 SKIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEE 749
            ...::.:|:.....||.||||||:|||.:|::||.:.:||.||..|:::||..::...:|:.::.
  Fly  1019 VAKIQRIQANGIRVAMVGDGVNDSPALAQADVGITIAAGTDVAAEASDIVLMRNDLLDVVACLDL 1083

  Fly   750 GRAIYNNMKQFIRY-LISSNIGEVVSIFLTAALGLPE--ALIPVQLLWVNLVTDGLPATALGFNP 811
            .|.....    ||| ...:::..::.|.|.:.|..|.  .|:|    |:..|.....:.::..:.
  Fly  1084 SRCTVRR----IRYNFFFASMYNLLGIPLASGLFAPYGFTLLP----WMASVAMAASSVSVVCSS 1140

  Fly   812 PDLDIMEKPPRK 823
            ..|.:..||..|
  Fly  1141 LLLKMYRKPTAK 1152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 197/857 (23%)
ATP7NP_001259466.1 HMA 16..78 CDD:238219
HMA 97..159 CDD:238219
HMA 214..274 CDD:238219
ZntA 285..1131 CDD:225127 193/834 (23%)
HMA 287..350 CDD:238219
E1-E2_ATPase 489..735 CDD:278548 69/280 (25%)
COG4087 <984..1085 CDD:226572 39/131 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438603
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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