DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SERCA and ATP2C1

DIOPT Version :9

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_001365440.1 Gene:ATP2C1 / 27032 HGNCID:13211 Length:983 Species:Homo sapiens


Alignment Length:1003 Identity:342/1003 - (34%)
Similarity:517/1003 - (51%) Gaps:155/1003 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKILLLAAIISF 73
            |.:..:....|.:.||...::...:..:|.||....|.:.:|:..:.||.:.|:.:||.:|:||.
Human    65 VSEVASILQADLQNGLNKCEVSHRRAFHGWNEFDISEDEPLWKKYISQFKNPLIMLLLASAVISV 129

  Fly    74 VLALFEEHEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVVRQDKSGIQ 138
            ::..|::       .|...|.:||::..|.|   ||..:|.::|.|.:..|.....||:.|  ::
Human   130 LMHQFDD-------AVSITVAILIVVTVAFV---QEYRSEKSLEELSKLVPPECHCVREGK--LE 182

  Fly   139 KVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDAIPDPRAVNQD 203
            ...|:::||||.|.:||||::|||:|:  ..:..|.||:|.||||:....|.|  .|.|.|.|.|
Human   183 HTLARDLVPGDTVCLSVGDRVPADLRL--FEAVDLSIDESSLTGETTPCSKVT--APQPAATNGD 243

  Fly   204 ---KKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLS---- 261
               :.||.|.||.|..|||:|||||||.::..|::...|...|..|||||:.:|..|:|||    
Human   244 LASRSNIAFMGTLVRCGKAKGVVIGTGENSEFGEVFKMMQAEEAPKTPLQKSMDLLGKQLSFYSF 308

  Fly   262 KVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM 326
            .:|.:|.:..|.:.              |..:..|.|:|:|||||||||||.|:|..||||..||
Human   309 GIIGIIMLVGWLLG--------------KDILEMFTISVSLAVAAIPEGLPIVVTVTLALGVMRM 359

  Fly   327 AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFEMTGSTYEP 391
            .||.|||:.||.||||||.:|||||||||||.|:|:|:.:|..|.        |..|:||..|..
Human   360 VKKRAIVKKLPIVETLGCCNVICSDKTGTLTKNEMTVTHIFTSDG--------LHAEVTGVGYNQ 416

  Fly   392 IGEVFLNGQRIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEKVGEATETALIVLAEKLNSFS 456
            .|||.::|..:.......:..:.....:|||:.|..|..      :|:.||.|||.||.|:    
Human   417 FGEVIVDGDVVHGFYNPAVSRIVEAGCVCNDAVIRNNTL------MGKPTEGALIALAMKM---- 471

  Fly   457 VNKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCT-PLKASRLGTGPKL-FVKGAPE 519
                |||          .::..:.::....||.::|.|:..|. ..:..|    |:: |:|||.|
Human   472 ----GLD----------GLQQDYIRKAEYPFSSEQKWMAVKCVHRTQQDR----PEICFMKGAYE 518

  Fly   520 GVLERCTHARVGTTKVPLTSALKAKILALTGQYGTGRDT------------LRCLALAVADSPMK 572
            .|::.||           |...|.:.|.||.|.   ||.            ||.|||  |..|  
Human   519 QVIKYCT-----------TYQSKGQTLTLTQQQ---RDVYQQEKARMGSAGLRVLAL--ASGP-- 565

  Fly   573 PDEMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICR 637
                :||          .|||:|:||::||||..|.:::....|:|:.:.:||||::.||.||..
Human   566 ----ELG----------QLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGDSQETAVAIAS 616

  Fly   638 RIGVFAEDEDTTGKSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMTG 702
            |:|::::    |.:|.||.|.|.:...:....|.:..:|.|..|:||.||::.||....:.||||
Human   617 RLGLYSK----TSQSVSGEEIDAMDVQQLSQIVPKVAVFYRASPRHKMKIIKSLQKNGSVVAMTG 677

  Fly   703 DGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLIS 766
            ||||||.|||.|:||:||| :||.|.|.||:|:|.||:|.:|:||:|||:.||||:|.|:|:.:|
Human   678 DGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQLS 742

  Fly   767 SNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRKADEGLISG 831
            ::|..:..|.|...:..|..|..:|:||:|::.||.||.:||..|.|.|::.||||...:.:::.
Human   743 TSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIRKPPRNWKDSILTK 807

  Fly   832 WLFFRYMAIGFYVGAATVGAAAWWFVFSDEGPKLSYWQLTHHLSCLGGGDEFKGVDCKIFSDPHA 896
            .|..:.:.....:...|:      |||         |:            |.:  |..|  .|..
Human   808 NLILKILVSSIIIVCGTL------FVF---------WR------------ELR--DNVI--TPRD 841

  Fly   897 MTMALSVLVTIEMLNAMNSLSENQSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTP 961
            .||..:..|..:|.||::|.|:.:|:..:....|.....::..|.....:::|...|..|||...
Human   842 TTMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNRMFCYAVLGSIMGQLLVIYFPPLQKVFQTES 906

  Fly   962 LSAEEWITVMKFSIPVVLLDETLKFVAR 989
            ||..:.:.::..:..|.::.|.:|.|.|
Human   907 LSILDLLFLLGLTSSVCIVAEIIKKVER 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 341/1001 (34%)
ATP2C1NP_001365440.1 ATPase-IIA2_Ca 57..937 CDD:130585 342/1003 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0202
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 1 1.010 - - D100699at2759
OrthoFinder 1 1.000 - - FOG0000231
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100158
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.730

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