DRSC/TRiP Functional Genomics Resources

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Protein Alignment SERCA and Atp1a2

DIOPT Version :10

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_036637.1 Gene:Atp1a2 / 24212 RGDID:2168 Length:1020 Species:Rattus norvegicus


Alignment Length:1072 Identity:320/1072 - (29%)
Similarity:513/1072 - (47%) Gaps:179/1072 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DGHSKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKILLL 67
            |.|..::::....:..|..:|||..:.:....:.|||.|........|.....|.......:|.:
  Rat    40 DDHKLSLDELGRKYQVDLSKGLTNQRAQDILARDGPNALTPPPTTPEWVKFCRQLFGGFSILLWI 104

  Fly    68 AAIISF----VLALFEEHEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMGK 128
            .|::.|    :||..|:.......:: .:|:..::|.......:||..:...:::.|...|:...
  Rat   105 GALLCFLAYGILAAMEDEPSNDNLYL-GIVLAAVVIVTGCFSYYQEAKSSKIMDSFKNMVPQQAL 168

  Fly   129 VVRQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDA 193
            |:|:.:.  .::.|:|:|.||||||..||::|||:||  |.|...::|.|.|||||....:    
  Rat   169 VIREGEK--MQINAEEVVVGDLVEVKGGDRVPADLRI--ISSHGCKVDNSSLTGESEPQTR---- 225

  Fly   194 IPDPRAVNQ---DKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDE 255
              .|...::   :.:||.|..||...|.|||:||.||..|.:|:|.|..|..|..:||:..:::.
  Rat   226 --SPEFTHENPLETRNICFFSTNCVEGTARGIVIATGDRTVMGRIATLASGLEVGQTPIAMEIEH 288

  Fly   256 FGEQLSKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLA 320
            |.:.::.|...:.|:.:.:::      ..|.||::..|:    .:.:.||.:||||.|.:|.||.
  Rat   289 FIQLITGVAVFLGVSFFVLSL------ILGYSWLEAVIF----LIGIIVANVPEGLLATVTVCLT 343

  Fly   321 LGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFEMT 385
            |..:|||:||.:|::|.:|||||.||.||||||||||.|:|:|:.|:..:::...|::   .:.:
  Rat   344 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTT---EDQS 405

  Fly   386 GSTYEPIGEVFLNGQRIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEKV--------GEATE 442
            |:|::...              .|...||.|..:||.:.     ||...|.:        |:|:|
  Rat   406 GATFDKRS--------------PTWTALSRIAGLCNRAV-----FKAGQENISVSKRDTAGDASE 451

  Fly   443 TALIVLAEKLNSFSVNKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLG 507
            :||:...| |:..||.|  :..|:..:|   ||......::.|.......|..|:.         
  Rat   452 SALLKCIE-LSCGSVRK--MRDRNPKVA---EIPFNSTNKYQLSIHEREDSPQSHV--------- 501

  Fly   508 TGPKLFVKGAPEGVLERCTHARVGTTKVPLTSALKAKILALTGQY----GTGRDTLRCLALAVAD 568
                |.:|||||.:|:||:...|...::||...::.   |....|    |.|.   |.|.....:
  Rat   502 ----LVMKGAPERILDRCSTILVQGKEIPLDKEMQD---AFQNAYMELGGLGE---RVLGFCQLN 556

  Fly   569 SP-------MKPDEMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITG 626
            .|       .|.|..:|...|:      .|.|||::.|:||||..|.|::.:||:|||:||::||
  Rat   557 LPSGKFPRGFKFDTDELNFPTE------KLCFVGLMSMIDPPRAAVPDAVGKCRSAGIKVIMVTG 615

  Fly   627 DNKATAEAICRRIGVFAEDEDTTGKSYSGR---EFDDLSPTEQKAAVARSR-------------- 674
            |:..||:||.:.:|:.:|..:|. :..:.|   ....::|.|.||.|....              
  Rat   616 DHPITAKAIAKGVGIISEGNETV-EDIAARLNIPVSQVNPREAKACVVHGSDLKDMTSEQLDEIL 679

  Fly   675 ------LFSRVEPQHKSKIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAE 732
                  :|:|..||.|..|||..|....|.|:|||||||:||||||:|||||| ||:.|:|.||:
  Rat   680 RDHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGIAMGISGSDVSKQAAD 744

  Fly   733 MVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNL 797
            |:|.||||:|||:.|||||.|::|:|:.|.|.::|||.|:....|.....:|..|..|.:|.::|
  Rat   745 MILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIIANIPLPLGTVTILCIDL 809

  Fly   798 VTDGLPATALGFNPPDLDIMEKPPRKA------DEGLIS------GWL-----FFRYMAI----G 841
            .||.:||.:|.:...:.|||::.||.:      :|.|||      |.:     ||.|..|    |
  Rat   810 GTDMVPAISLAYEAAESDIMKRQPRNSQTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENG 874

  Fly   842 FYVGAATVGAAAWWFVFSDEGPKLSYWQLTHHLSCLGGGDEFKGVDCKI--FSDPHAMTMALSVL 904
            | :.:..:|....|...:....:.||            |.|:.....|:  |:...|...::.|:
  Rat   875 F-LPSRLLGIRLDWDDRTTNDLEDSY------------GQEWTYEQRKVVEFTCHTAFFASIVVV 926

  Fly   905 VTIEML---NAMNSL----SENQSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTPL 962
            ...:::   ...||:    .:|:.||       ..|:...||:..|.    |...:....::.||
  Rat   927 QWADLIICKTRRNSVFQQGMKNKILI-------FGLLEETALAAFLS----YCPGMGVALRMYPL 980

  Fly   963 SAEEWITVMKFSIPVVLLDETLKFVARKIADG 994
            ....|.....:|:.:.:.||..|.:.|:...|
  Rat   981 KVTWWFCAFPYSLLIFIYDEVRKLILRRYPGG 1012

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 317/1063 (30%)
Atp1a2NP_036637.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
ATPase-IIC_X-K 30..1020 CDD:273445 320/1072 (30%)
Interaction with phosphoinositide-3 kinase. /evidence=ECO:0000250 80..82 0/1 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..231 8/24 (33%)
Blue background indicates that the domain is not in the aligned region.

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