DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SERCA and Atp2a2

DIOPT Version :10

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_001103610.1 Gene:Atp2a2 / 11938 MGIID:88110 Length:1044 Species:Mus musculus


Alignment Length:989 Identity:719/989 - (72%)
Similarity:837/989 - (84%) Gaps:1/989 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDGHSKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKIL 65
            ||:.|:||||:.|..||.:...||:|:|:|..::::|.||||.||||::.:||:|||:||||:||
Mouse     1 MENAHTKTVEEVLGHFGVNESTGLSLEQVKKLKERWGSNELPAEEGKTLLELVIEQFEDLLVRIL 65

  Fly    66 LLAAIISFVLALFEEHEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVV 130
            ||||.||||||.|||.|||.||||||.||||||:|||:||||||||||:|||||||||||||||.
Mouse    66 LLAACISFVLAWFEEGEETITAFVEPFVILLILVANAIVGVWQERNAENAIEALKEYEPEMGKVY 130

  Fly   131 RQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDAIP 195
            |||:..:|:::||:|||||:||::||||:|||||:|.|.|||||:|||||||||||||||||.:|
Mouse   131 RQDRKSVQRIKAKDIVPGDIVEIAVGDKVPADIRLTSIKSTTLRVDQSILTGESVSVIKHTDPVP 195

  Fly   196 DPRAVNQDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDEFGEQL 260
            |||||||||||:||||||:|||||.|||:.||::|.|||||.||..||:.:||||||||||||||
Mouse   196 DPRAVNQDKKNMLFSGTNIAAGKAMGVVVATGVNTEIGKIRDEMVATEQERTPLQQKLDEFGEQL 260

  Fly   261 SKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRR 325
            |||||:||:|||.|||||||||.||||||:|||||||||||||||||||||||||||||||||||
Mouse   261 SKVISLICIAVWIINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRR 325

  Fly   326 MAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFEMTGSTYE 390
            ||||||||||||||||||||||||||||||||||||||.||||.|||||:..|..||.:|||||.
Mouse   326 MAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFILDKVEGDTCSLNEFSITGSTYA 390

  Fly   391 PIGEVFLNGQRIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEKVGEATETALIVLAEKLNSF 455
            |||||..:.:.:|...||.|.||:|||.:|||||:||||.|..:|||||||||||..|.||:|.|
Mouse   391 PIGEVQKDDKPVKCHQYDGLVELATICALCNDSALDYNEAKGVYEKVGEATETALTCLVEKMNVF 455

  Fly   456 SVNKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTGPKLFVKGAPEG 520
            .....||.:...|.||...|:...||||||||||||||||.||||.|.||.... |:||||||||
Mouse   456 DTELKGLSKIERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPNKPSRTSMS-KMFVKGAPEG 519

  Fly   521 VLERCTHARVGTTKVPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPMKPDEMDLGDSTKFY 585
            |::||||.|||:||||:|..:|.||:::..::|:|.|||||||||..|:|:|.:||.|.||..|.
Mouse   520 VIDRCTHIRVGSTKVPMTPGVKQKIMSVIREWGSGSDTLRCLALATHDNPLKREEMHLEDSANFI 584

  Fly   586 QYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFAEDEDTTG 650
            :||.||||||.||||||||.||..|:..||.||||||:||||||.||.|||||||:|.:|||.|.
Mouse   585 KYETNLTFVGCVGMLDPPRIEVASSVKLCRQAGIRVIMITGDNKGTAVAICRRIGIFGQDEDVTS 649

  Fly   651 KSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMTGDGVNDAPALKKAE 715
            |:::|||||:|||:.|:.|...:|.|:||||.|||||||||||.:||:|||||||||||||||:|
Mouse   650 KAFTGREFDELSPSAQRDACLNARCFARVEPSHKSKIVEFLQSFDEITAMTGDGVNDAPALKKSE 714

  Fly   716 IGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAA 780
            |||||||||||||:|:||||||||||:||:|||||||||||||||||||||||:||||.||||||
Mouse   715 IGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAA 779

  Fly   781 LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRKADEGLISGWLFFRYMAIGFYVG 845
            ||.||||||||||||||||||||||||||||||||||.||||...|.||||||||||:|||.|||
Mouse   780 LGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYVG 844

  Fly   846 AATVGAAAWWFVFSDEGPKLSYWQLTHHLSCLGGGDEFKGVDCKIFSDPHAMTMALSVLVTIEML 910
            |||||||||||:.:|.||::|::||:|.|.|.....:|.||||.||..|:.|||||||||||||.
Mouse   845 AATVGAAAWWFIAADGGPRVSFYQLSHFLQCKEDNPDFDGVDCAIFESPYPMTMALSVLVTIEMC 909

  Fly   911 NAMNSLSENQSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTPLSAEEWITVMKFSI 975
            ||:|||||||||:.||||.|:||:||:.||.:|||:||||:.|..:||:|||:..:|:.|:|.|:
Mouse   910 NALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNLTQWLMVLKISL 974

  Fly   976 PVVLLDETLKFVAR 989
            ||:|:|||||||||
Mouse   975 PVILMDETLKFVAR 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 715/983 (73%)
Atp2a2NP_001103610.1 P-type_ATPase_SERCA 5..988 CDD:319778 715/983 (73%)
Interaction with HAX1. /evidence=ECO:0000250 575..594 11/18 (61%)
Interaction with PLN. /evidence=ECO:0000250|UniProtKB:P04191 787..807 19/19 (100%)
Interaction with TMEM64 and PDIA3. /evidence=ECO:0000269|PubMed:23395171 788..1044 142/201 (71%)
Interaction with PLN. /evidence=ECO:0000250|UniProtKB:P04191 931..942 6/10 (60%)

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