DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SERCA and Atp2a1

DIOPT Version :9

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_031530.2 Gene:Atp2a1 / 11937 MGIID:105058 Length:994 Species:Mus musculus


Alignment Length:994 Identity:719/994 - (72%)
Similarity:836/994 - (84%) Gaps:0/994 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDGHSKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKIL 65
            ||..|||:.|:.|::||.....|||.||:|.:.:||||||||.|||||:|:||:|||:||||:||
Mouse     1 MEAAHSKSTEECLSYFGVSETTGLTPDQVKRHLEKYGPNELPAEEGKSLWELVVEQFEDLLVRIL 65

  Fly    66 LLAAIISFVLALFEEHEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVV 130
            ||||.||||||.|||.|||.||||||.||||||||||:||||||||||:|||||||||||||||.
Mouse    66 LLAACISFVLAWFEEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVY 130

  Fly   131 RQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDAIP 195
            |.|:..:|:::|::|||||:|||:||||:||||||..|.|||||:|||||||||||||||||.:|
Mouse   131 RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTDPVP 195

  Fly   196 DPRAVNQDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDEFGEQL 260
            |||||||||||:||||||:|||||.|:|..||:||.|||||.:|:.||:.|||||||||||||||
Mouse   196 DPRAVNQDKKNMLFSGTNIAAGKAVGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQL 260

  Fly   261 SKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRR 325
            |||||:||||||.|||||||||.|||||.:|||||||||||||||||||||||||||||||||||
Mouse   261 SKVISLICVAVWLINIGHFNDPVHGGSWFRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRR 325

  Fly   326 MAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFEMTGSTYE 390
            ||||||||||||||||||||||||||||||||||||||.:|||.|||:|:..|..||.:|||||.
Mouse   326 MAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDVCSLNEFSITGSTYA 390

  Fly   391 PIGEVFLNGQRIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEKVGEATETALIVLAEKLNSF 455
            |.|||..|.:.::|..||.|.||:|||.:||||::|:||.|..:|||||||||||..|.||:|.|
Mouse   391 PEGEVLKNDKPVRAGQYDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVF 455

  Fly   456 SVNKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTGPKLFVKGAPEG 520
            :.....|.:...|.||...|....||||||||||||||||.||:|.|:||...|.|:||||||||
Mouse   456 NTEVRSLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEG 520

  Fly   521 VLERCTHARVGTTKVPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPMKPDEMDLGDSTKFY 585
            |::||.:.|||||:||||..:|.||:::..::|||||||||||||..|:|.|.:||.|.||.||.
Mouse   521 VIDRCNYVRVGTTRVPLTGPVKEKIMSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSAKFM 585

  Fly   586 QYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFAEDEDTTG 650
            :||::|||||||||||||||||..||..||.||||||:||||||.||.|||||||:|:|:|:.|.
Mouse   586 EYEMDLTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFSENEEVTD 650

  Fly   651 KSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMTGDGVNDAPALKKAE 715
            ::|:|||||||...||:.|..|:..|:||||.|||||||:|||.:||:|||||||||||||||||
Mouse   651 RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAE 715

  Fly   716 IGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAA 780
            |||||||||||||:|:||||||||||:||:|||||||||||||||||||||||:||||.||||||
Mouse   716 IGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAA 780

  Fly   781 LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRKADEGLISGWLFFRYMAIGFYVG 845
            |||||||||||||||||||||||||||||||||||||::|||...|.||||||||||||||.|||
Mouse   781 LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVG 845

  Fly   846 AATVGAAAWWFVFSDEGPKLSYWQLTHHLSCLGGGDEFKGVDCKIFSDPHAMTMALSVLVTIEML 910
            |||||||||||:::::||.:||.||||.:.|.....||.|:||::|..|..|||||||||||||.
Mouse   846 AATVGAAAWWFLYAEDGPHVSYHQLTHFMQCTEHNPEFDGLDCEVFEAPEPMTMALSVLVTIEMC 910

  Fly   911 NAMNSLSENQSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTPLSAEEWITVMKFSI 975
            ||:|||||||||:.||||.|:||:||:.||.:|||:|||||.|..:|::..|...:|:.|:|.|:
Mouse   911 NALNSLSENQSLLRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLRALDFTQWLMVLKISL 975

  Fly   976 PVVLLDETLKFVARKIADG 994
            ||:.|||.|||:||...:|
Mouse   976 PVIGLDELLKFIARNYLEG 994

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 714/983 (73%)
Atp2a1NP_031530.2 P-type_ATPase_SERCA 5..989 CDD:319778 714/983 (73%)
Interaction with PLN. /evidence=ECO:0000250|UniProtKB:P04191 788..808 19/19 (100%)
Interaction with PLN. /evidence=ECO:0000250|UniProtKB:P04191 932..943 6/10 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 352 1.000 Domainoid score I1004
eggNOG 1 0.900 - - E2759_KOG0202
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7635
Inparanoid 1 1.050 1448 1.000 Inparanoid score I115
Isobase 1 0.950 - 0 Normalized mean entropy S832
OMA 1 1.010 - - QHG53587
OrthoDB 1 1.010 - - D100699at2759
OrthoFinder 1 1.000 - - FOG0000231
OrthoInspector 1 1.000 - - otm43847
orthoMCL 1 0.900 - - OOG6_100158
Panther 1 1.100 - - LDO PTHR42861
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3239
SonicParanoid 1 1.000 - - X745
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.820

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