DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SERCA and atp4a

DIOPT Version :9

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:XP_031762229.1 Gene:atp4a / 100488221 XenbaseID:XB-GENE-486104 Length:1031 Species:Xenopus tropicalis


Alignment Length:1056 Identity:312/1056 - (29%)
Similarity:496/1056 - (46%) Gaps:157/1056 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 HSKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKILLLAA 69
            |..|:|:....:.|:..:|:..........:.|||||...:|...:.....|....|..::.:||
 Frog    51 HEITIEELEQKYNTNVTKGMKATFAAEILIRDGPNELKPPKGTPEYVKFARQLAGGLQCLMWVAA 115

  Fly    70 IISFVLALFEEHEETFTAFVEPLVILLILIANAVV----GVWQERNAESAIEALKEYEPEMGKVV 130
            :|..:....|..:...|: .:.|.:.:.|||..||    |.:||..:.:.|.:.|...|:...|:
 Frog   116 VICLIAFGIECAQGDLTS-ADNLYLAITLIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVL 179

  Fly   131 RQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIK---HTD 192
            |..:.  .::.|.::|.|||||:..||::||||||  |.|...::|.|.|||||....:   :|.
 Frog   180 RDGEK--FQINANQLVVGDLVEIKGGDRVPADIRI--ITSQGCKVDNSSLTGESEPQTRSPEYTH 240

  Fly   193 AIPDPRAVNQDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDEFG 257
            ..|      .:.:||.|..|....|.|.||:|.||..|.||:|.:..|.....|||:        
 Frog   241 ESP------LETRNIAFFSTMCLEGTATGVIINTGDRTIIGRIASLASGVGNEKTPI-------- 291

  Fly   258 EQLSKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAV-------------ALAVAAIPE 309
                           ||.|.||.|...|.:...||.::....|             |:.||.:||
 Frog   292 ---------------AIEIEHFVDIIAGLAIFFGATFFVVAMVIGYPFLRAMVFFMAIVVAYVPE 341

  Fly   310 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEG 374
            ||.|.:|.||:|..:|:|:||.:|::|.:|||||.|||||||||||||.|:|:||.::..:::..
 Frog   342 GLLATVTVCLSLTAKRLARKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNQIHS 406

  Fly   375 NDSSFLEFEMTGSTYEPIGEVFLNGQRIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEK--- 436
            .|::   .:.:|.:::...              ||.:.||.:..:||.:.....:......|   
 Frog   407 ADTT---EDQSGQSFDQTS--------------DTWRALSKVTSLCNRACFKSGQDGVPIPKRIV 454

  Fly   437 VGEATETALIVLAEKLNSFSVNKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRK---SMSSYC 498
            :|:|:||||:..:|                ..:....|...::||...|.|:...|   |:....
 Frog   455 IGDASETALLKFSE----------------LTVGNVMEYRDRFKKATELPFNSTNKFQLSIHELQ 503

  Fly   499 TPLKASRLGTGPKLFVKGAPEGVLERCTHARVGTTKVPLTSALKAKILALTGQY----GTGRDTL 559
            .||....|     |.:|||||.:||||:...:...::||....|.   |....|    |.|...|
 Frog   504 DPLDLRYL-----LVMKGAPERILERCSTIMIKGQELPLDEQWKE---AFQTAYMDLGGLGERVL 560

  Fly   560 RCLALAVADSPMKPDEMDLGDSTKFYQYEVN-----LTFVGVVGMLDPPRKEVFDSIVRCRAAGI 619
            ....|.:       :|.:......|...|:|     |.|.|::.|:||||..|.|::::||.|||
 Frog   561 GFCHLYL-------NEKEYPRGFSFDTEEMNFPTSGLCFAGLISMIDPPRATVPDAVMKCRTAGI 618

  Fly   620 RVIVITGDNKATAEAICRRIGVFAEDEDTT--------------------GKSYSGREFDDLSPT 664
            |||::|||:..||:||...:|:.:|..:|.                    ....:|.:..|::..
 Frog   619 RVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRIPVEQVNKRDARACVINGGQLKDMTSE 683

  Fly   665 EQKAAVA--RSRLFSRVEPQHKSKIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAV 726
            |...|:.  ...:|:|..||.|..|||..|.:..|.|:|||||||:||||||:||:||| :|:..
 Frog   684 ELVEALKLHPEMVFARTSPQQKLIIVESCQKLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDA 748

  Fly   727 AKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVS--IFLTAALGLPEALIP 789
            ||:||:|:|.||||:|||:.||:||.|::|:|:.|.|.::.||.|:..  |::||::.||...|.
 Frog   749 AKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELAPYLIYITASVPLPLGCIT 813

  Fly   790 VQLLWVNLVTDGLPATALGFNPPDLDIMEKPPR--KADEGLISGWLFFRYMAIGF------YVGA 846
            :  |::.|.||..|:.:|.:...:.|||...||  :.|..:......:.|..:|.      :|..
 Frog   814 I--LFIELCTDIFPSVSLAYERAESDIMHLKPRNPRRDRLVNEALAVYSYFQVGIIQSFAGFVDY 876

  Fly   847 ATVGAAAWWFVFSDEGPKLSYWQLTHHLSCL--GGGDEFKGVDCKIFSDPHAMTMALSVLVTIEM 909
            .||.|...||.....|.: |:|: ..||..|  ..|.::. ...:::...:..|:....:...::
 Frog   877 FTVMAQEGWFPAYVLGLR-SHWE-NQHLQDLEDSYGQQWT-FSQRLYQQYNCYTVFFISIEVCQI 938

  Fly   910 LNAMNSLSENQSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTPLSAEEWITVMKFS 974
            .:.:...:...|:.....:.|..|:.::.....|...:.|...:..||...|:..:.|:..:.|.
 Frog   939 ADVLIRKTRRLSVFQQGFFRNKVLVIAIVFQLCLGNFLCYCPGMPNVFNFMPIRFQWWLVPVPFG 1003

  Fly   975 IPVVLLDETLKFVARK 990
            |.:.:.||..|...|:
 Frog  1004 ILIFVYDEIRKLGVRR 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 311/1053 (30%)
atp4aXP_031762229.1 ATPase-IIC_X-K 39..1031 CDD:273445 312/1056 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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