DRSC/TRiP Functional Genomics Resources

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Protein Alignment thg1l and THG

DIOPT Version :9

Sequence 1:NP_001007456.1 Gene:thg1l / 492814 ZFINID:ZDB-GENE-041114-170 Length:269 Species:Danio rerio
Sequence 2:NP_001188815.1 Gene:THG / 34876 FlyBaseID:FBgn0283659 Length:286 Species:Drosophila melanogaster


Alignment Length:264 Identity:140/264 - (53%)
Similarity:186/264 - (70%) Gaps:18/264 - (6%)


- Green bases have known domain annotations that are detailed below.


Zfish     1 MAKSKFEYVRNFELDDTCLRNCYIVVRLDGRNLHKFSDQHNFTKPNDDRALGLMSRSACSVMEEL 65
            ||.|:||||::||.||:.|.|.:||:|:||:..||||..|:|.||||:.||.:|:.:|.:||:|.
  Fly     1 MACSRFEYVKSFEQDDSILPNVWIVIRIDGKKFHKFSKTHDFEKPNDENALNVMNAAATAVMQEF 65

Zfish    66 DDITIAYGQSDEFSFVFKRSTNWFKRRASKLMTHVTSQFSSSFVFYWKEYFGEQPLLYPPSFDGR 130
            .||.:|||||||:||||::.|..||||::||:|:|||.||||:|..|.::. ..||.|.|.||||
  Fly    66 RDIVLAYGQSDEYSFVFRKETAAFKRRSAKLLTYVTSLFSSSYVMQWSKWM-NLPLAYAPCFDGR 129

Zfish   131 VVLYPSNRNVRDYLSWRQADCHINNLYNTAFWTLVQKGGLTTTQAEERLNGTLATDKNEILFSEF 195
            ||||||.:|::|||||||||.|:|||||||||.||.:.|||..|||.:|.||.:.||||:||.||
  Fly   130 VVLYPSEQNLKDYLSWRQADVHVNNLYNTAFWKLVLEKGLTNQQAEAKLRGTFSADKNELLFQEF 194

Zfish   196 NINYNNESSVYKKGTTLIWEKVNETTTKQIKRPNEEETEVTVTRTRKKVTSHSCDVIGDQFWDEH 260
            .|||||..::|:|||.|:.::|                 :...::|:.|.....|:|..|||.||
  Fly   195 GINYNNLPAMYRKGTILLRKRV-----------------ILGEKSRQAVVPLHEDLISSQFWKEH 242

Zfish   261 PDIL 264
            .:||
  Fly   243 TEIL 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thg1lNP_001007456.1 Thg1 2..257 CDD:226508 133/254 (52%)
Thg1 9..135 CDD:282322 70/125 (56%)
Thg1C 138..252 CDD:291110 53/113 (47%)
THGNP_001188815.1 Thg1 2..239 CDD:226508 133/254 (52%)
Thg1 9..134 CDD:282322 70/125 (56%)
Thg1C 137..234 CDD:291110 53/113 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595587
Domainoid 1 1.000 163 1.000 Domainoid score I3943
eggNOG 1 0.900 - - E1_COG4021
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5959
Inparanoid 1 1.050 287 1.000 Inparanoid score I2816
OMA 1 1.010 - - QHG54375
OrthoDB 1 1.010 - - D1152974at2759
OrthoFinder 1 1.000 - - FOG0004478
OrthoInspector 1 1.000 - - oto41414
orthoMCL 1 0.900 - - OOG6_103009
Panther 1 1.100 - - LDO PTHR12729
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1510
SonicParanoid 1 1.000 - - X3173
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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