DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-87B and Ppef1

DIOPT Version :9

Sequence 1:NP_524937.1 Gene:Pp1-87B / 49260 FlyBaseID:FBgn0004103 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_038955765.1 Gene:Ppef1 / 317498 RGDID:1562772 Length:664 Species:Rattus norvegicus


Alignment Length:281 Identity:90/281 - (32%)
Similarity:137/281 - (48%) Gaps:40/281 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 KSREIFLSQPILLELEA-PLK---ICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQS 98
            ::|:|....|....::. |.|   ||||:||:..||:.:|...|.|.|.| |:|.||:||||..|
  Rat   170 EARKILKQMPNFTRIQTFPAKEITICGDLHGKLDDLMLIFYKNGLPSEKNPYVFNGDFVDRGNNS 234

  Fly    99 LETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRYSI---KLWKTFTDCFNCLPVA 160
            :|.:.:||...:.|..:..|.|||||...:|..|||..|..::|.:   |:.:...:.:..||:.
  Rat   235 MEILMILLVSFLVYPTDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHGKKILQVLEELYTWLPIG 299

  Fly   161 AIVDEKIFCCHGGL--SPDLTSMEQIRR------IMRPTDVPDQ--------------------- 196
            .|:|.:|...|||:  |.||..::|::|      :|.|.....:                     
  Rat   300 TIIDNEILVIHGGISESTDLNILQQLQRNKMKSVLMPPMSTNQECNIKKNKAGPSEQSASEQLTK 364

  Fly   197 ---GLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLQKHEFDLICRAHQVVEDGYEFFAK 258
               ..:.|||||||......:....||....||.:|.:|.|.|::..::.|:|:...||||....
  Rat   365 LEWEQIIDLLWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLNKNQLKMVIRSHECKPDGYEICHD 429

  Fly   259 RMLVTLFSAPNYCGEFDNAGA 279
            ..::|:|||.||..|..|.||
  Rat   430 GKVITVFSASNYYEEGSNRGA 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-87BNP_524937.1 MPP_PP1_PPKL 6..296 CDD:277359 90/281 (32%)
Ppef1XP_038955765.1 IQ 40..>57 CDD:197470
MPP_RdgC 140..466 CDD:277364 90/281 (32%)
PTZ00183 505..647 CDD:185503
EF-hand_7 582..650 CDD:404394
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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