DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-87B and Ppef2

DIOPT Version :10

Sequence 1:NP_524937.1 Gene:Pp1-87B / 49260 FlyBaseID:FBgn0004103 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_038947795.1 Gene:Ppef2 / 305246 RGDID:1307093 Length:793 Species:Rattus norvegicus


Alignment Length:358 Identity:94/358 - (26%)
Similarity:138/358 - (38%) Gaps:132/358 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 ICGDIHGQYYDLLRLFEYGGFP-PESNYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFLLRGN 122
            :|||:|||..||:.:|...|.| ||..|:|.||:|||||.|:|.:.:|.|:.:.|.:.|.|.|||
  Rat   215 VCGDLHGQLDDLIFIFYKNGLPSPERAYVFNGDFVDRGKDSVEVLMVLFAFMLVYPKEFHLNRGN 279

  Fly   123 HECASINRIYGFYDECKRRYSI---KLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLTSME-- 182
            ||...:|..|||..|...:|.|   |:.:|..|.|..||:|.:||||:...|||:| |.|.:|  
  Rat   280 HEDHLVNLRYGFTKEVMHKYKIHGKKILRTLQDVFCWLPLATLVDEKVLVLHGGVS-DKTDLELL 343

  Fly   183 ----------------------------------------------------------------- 182
                                                                             
  Rat   344 AKLDRHKIVSTMRCKTRKESENLEEQKRKDNQTSSAQKPTPWFLPQSRSLPSSPFHLGSGFKAYK 408

  Fly   183 ---------------------QIRR------------------------------------IMRP 190
                                 |:||                                    :::|
  Rat   409 ACRSCSIPCGSAVSKELSRQGQVRRSMDLELELCRQQAGFLGIREKRESLPLADCDADAGGMLKP 473

  Fly   191 TDVPDQ-GLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLQKHEFDLICRAHQVVEDGYE 254
            |  |:: ..:.|:|||||...........||....||.:|..:.::|::...:.|:|:...:|||
  Rat   474 T--PEEWKQVVDILWSDPMAQEGCKANTVRGGGCYFGPDVTEQLMEKYKLQFLIRSHECKPEGYE 536

  Fly   255 FFAKRMLVTLFSAPNYCGEFDNAGAMMSVDDTL 287
            |...|.::|:|||.||.....|.||.:.:...|
  Rat   537 FCHNRKVLTIFSASNYYEVGSNRGAYVKLGPAL 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-87BNP_524937.1 MPP_PP1_PPKL 6..296 CDD:277359 94/358 (26%)
Ppef2XP_038947795.1 IQCD <60..81 CDD:467745
MPP_RdgC 161..577 CDD:277364 94/358 (26%)
FRQ1 617..762 CDD:444056
EFh 697..762 CDD:238008
Blue background indicates that the domain is not in the aligned region.

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