DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-87B and SPOM_SPBC3F6.01C

DIOPT Version :10

Sequence 1:NP_524937.1 Gene:Pp1-87B / 49260 FlyBaseID:FBgn0004103 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_596740.1 Gene:SPOM_SPBC3F6.01C / 2541004 PomBaseID:SPBC3F6.01C Length:473 Species:Schizosaccharomyces pombe


Alignment Length:259 Identity:98/259 - (37%)
Similarity:152/259 - (58%) Gaps:9/259 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 REIFLSQPILLEL----EAPLKICGDIHGQYYDLLRLFEYGGFP-PESNYLFLGDYVDRGKQSLE 100
            :|:....|.|:::    :..|.||||.||||:|||.:|:..|.| |.:.|||.||:||||..|.|
pombe   192 KELLEKTPSLIDIPVKGDETLVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRGSWSTE 256

  Fly   101 TICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRYSIKLWKTFTDCFNCLPVAAIVDE 165
            ....|.|||:.|.:..|:.|||||...:|::|||..||:.:|:.:.:..|::.|:.||:.:::.:
pombe   257 VAFTLYAYKLLYPDAVFINRGNHETDDMNKVYGFEGECRSKYNERTFNIFSETFSLLPLGSLISD 321

  Fly   166 KIFCCHGGL-SPDLTSMEQIRRIMR-PTDVPDQ-GLLCDLLWSDPDKDTMGWGENDRGVSFTFGA 227
            .....|||| |.|..:::|:|.|.| ....|.| ||:.::||:|| :...|.|.:.|||...||.
pombe   322 SYLVVHGGLFSDDNVTLDQLRNIDRFSKKQPGQSGLMMEMLWTDP-QPAPGRGPSKRGVGLQFGP 385

  Fly   228 EVVAKFLQKHEFDLICRAHQVVEDGYEFFAKRMLVTLFSAPNYCGEFDNAGAMMSVDDTLMCSF 291
            :|..:|.:.:....:.|:|:|.:.|||.......:|:|||||||....|.||::.|.:.:...|
pombe   386 DVSKRFCEANGLKAVIRSHEVRDQGYEVEHDGYCITVFSAPNYCDSTGNLGAVIKVKEDMELDF 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-87BNP_524937.1 MPP_PP1_PPKL 6..296 CDD:277359 98/259 (38%)
SPOM_SPBC3F6.01CNP_596740.1 PLN03088 1..>121 CDD:215568
TPR repeat 5..33 CDD:276809
TPR repeat 38..68 CDD:276809
TPR repeat 73..101 CDD:276809
MPP_PP5_C 152..467 CDD:277362 98/259 (38%)
Blue background indicates that the domain is not in the aligned region.

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