DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1-87B and F49E11.7

DIOPT Version :10

Sequence 1:NP_524937.1 Gene:Pp1-87B / 49260 FlyBaseID:FBgn0004103 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_502500.3 Gene:F49E11.7 / 186051 WormBaseID:WBGene00009893 Length:384 Species:Caenorhabditis elegans


Alignment Length:310 Identity:118/310 - (38%)
Similarity:170/310 - (54%) Gaps:33/310 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VMNIDSIISRLLEVRGARPGKNVQLSEGEIRGLCLKSREIFLS-QPILLELEAPLKICGDIHGQY 67
            :.:|:..:.|.|.|:.....:....::.|:..| ::|.|..|| ...|.::..|:.|.|||||||
 Worm     7 MFDINEFLKRHLFVKNWVNYRQQSYTKYELMQL-IESVEAALSVDDTLAKISPPVTIVGDIHGQY 70

  Fly    68 YDLLRLF-------------EYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFLL 119
            .||:|:.             .||..  .|.::|||||||||..|:|.|.|:.|.|:.|..|:.||
 Worm    71 PDLVRVLCNQNSKEDAKKKAAYGFC--NSRFVFLGDYVDRGHHSIECISLVFALKVVYPTNYILL 133

  Fly   120 RGNHECASINRIYGFYDECKRRY----SIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLTS 180
            |||||..|||..|||.:|...|.    ..::|:.|...|:.:|:|.:|..||.|.|||:||.|.|
 Worm   134 RGNHETKSINYTYGFREELVNRLGPIDGFEIWERFNVAFSWMPLACLVGHKILCMHGGISPKLHS 198

  Fly   181 MEQIRRIMRPTD--VPDQGLLCDLLWSDPD--------KDTMGWGEND-RGVSFTFGAEVVAKFL 234
            :::|..|.||..  :|| .|..||||:||.        :.|..:..|. ||:||.|....|....
 Worm   199 LKEINEIDRPVAEILPD-SLAQDLLWADPADGQGAMTVRSTPEYVPNGVRGLSFIFNEAAVRDTC 262

  Fly   235 QKHEFDLICRAHQVVEDGYEFFAKRMLVTLFSAPNYCGEFDNAGAMMSVD 284
            ::...:||.||||::.:|::|||.:.|:|:||||.|..|.||.||.:.|:
 Worm   263 KRLNINLIVRAHQMIPEGFKFFADQKLLTIFSAPRYMNETDNHGATLRVE 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-87BNP_524937.1 MPP_PP1_PPKL 6..296 CDD:277359 118/308 (38%)
F49E11.7NP_502500.3 PP2Ac 31..326 CDD:197547 114/286 (40%)

Return to query results.
Submit another query.