DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-87B and pph-6

DIOPT Version :9

Sequence 1:NP_524937.1 Gene:Pp1-87B / 49260 FlyBaseID:FBgn0004103 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_497714.2 Gene:pph-6 / 183199 WormBaseID:WBGene00007922 Length:331 Species:Caenorhabditis elegans


Alignment Length:260 Identity:113/260 - (43%)
Similarity:167/260 - (64%) Gaps:5/260 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LSEGEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYV 92
            |.|.:...||....:....:..::.:.:|:.||||||||:||||.||:.||..|.:.|:|:||||
 Worm    45 LPESDAVALCATLIDRLSLEANVVPVSSPVTICGDIHGQFYDLLELFKTGGTVPNTKYVFMGDYV 109

  Fly    93 DRGKQSLETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRY---SIKLWKTFTDCF 154
            |||..||||:.||....:||.....|||||||...|:.:|||||||:.:|   ::..|  |...|
 Worm   110 DRGHYSLETVTLLFCLLLKYPNQITLLRGNHESRRISNVYGFYDECQNKYGHGNVHKW--FCKVF 172

  Fly   155 NCLPVAAIVDEKIFCCHGGLSPDLTSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGENDR 219
            :.||:.|::||.:.|.|||||||:.:::.:..:.|..:||::|.|||::|||||.|...|..:.|
 Worm   173 DVLPIGALIDESVLCVHGGLSPDIRTIDSLMLLDRAQEVPNKGPLCDIMWSDPDDDVEDWVISQR 237

  Fly   220 GVSFTFGAEVVAKFLQKHEFDLICRAHQVVEDGYEFFAKRMLVTLFSAPNYCGEFDNAGAMMSVD 284
            |..|.|||:|..:||..::..|:||:||:|::|:::.....|.|::||||||....||.|:..:|
 Worm   238 GAGFVFGAKVTEEFLMNNDLSLLCRSHQLVDEGFKYMFNEKLATVWSAPNYCYRCGNAAAVFEID 302

  Fly   285  284
             Worm   303  302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-87BNP_524937.1 MPP_PP1_PPKL 6..296 CDD:277359 113/260 (43%)
pph-6NP_497714.2 MPP_PP2A_PP4_PP6 31..315 CDD:277360 113/260 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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