DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-87B and pph-5

DIOPT Version :9

Sequence 1:NP_524937.1 Gene:Pp1-87B / 49260 FlyBaseID:FBgn0004103 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001367002.1 Gene:pph-5 / 180263 WormBaseID:WBGene00012665 Length:496 Species:Caenorhabditis elegans


Alignment Length:244 Identity:104/244 - (42%)
Similarity:156/244 - (63%) Gaps:7/244 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 SQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQSLETICLL 105
            |.|.::|:..|    ..||||:|||:|||..:||..|:|.|:| |||.||:||||..|:|||..:
 Worm   221 SLPTMVEITVPTGKKFTICGDVHGQFYDLCNIFEINGYPSETNPYLFNGDFVDRGSFSVETIFTM 285

  Fly   106 LAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRYSIKLWKTFTDCFNCLPVAAIVDEKIFCC 170
            :.:|:.|..:||:.|||||...:|::|||..|.|.:|:.::...||:.|..||:..:::||||.|
 Worm   286 IGFKLLYPNHFFMSRGNHESDVMNKMYGFEGEVKAKYTQQMCDMFTETFCWLPLCHLINEKIFVC 350

  Fly   171 HGGL-SPDLTSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFL 234
            |||| ..|..::|.||:..|....||:|::|||||||| :...|...:.|||...||.:|.:|:.
 Worm   351 HGGLFKEDGVTLEDIRKTDRNRQPPDEGIMCDLLWSDP-QPINGRSPSKRGVGCQFGPDVTSKWC 414

  Fly   235 QKHEFDLICRAHQVVEDGYEFFAKRMLVTLFSAPNYCGEFDNAGAMMSV 283
            :.:..:.:.|:|:|..:|||........|:|||||||.:.:|.||.:::
 Worm   415 ETNGIEYVVRSHEVKPEGYEMHHNGQCFTVFSAPNYCDQMNNKGAFITI 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-87BNP_524937.1 MPP_PP1_PPKL 6..296 CDD:277359 104/244 (43%)
pph-5NP_001367002.1 PLN03088 29..>139 CDD:215568
TPR repeat 33..57 CDD:276809
TPR repeat 62..91 CDD:276809
TPR repeat 96..124 CDD:276809
MPP_PP5_C 176..490 CDD:277362 104/244 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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