DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-87B and gsp-1

DIOPT Version :9

Sequence 1:NP_524937.1 Gene:Pp1-87B / 49260 FlyBaseID:FBgn0004103 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001256250.1 Gene:gsp-1 / 179486 WormBaseID:WBGene00001747 Length:329 Species:Caenorhabditis elegans


Alignment Length:301 Identity:262/301 - (87%)
Similarity:282/301 - (93%) Gaps:1/301 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GDVMNIDSIISRLLEVRGARPGKNVQLSEGEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQ 66
            || :|||::|:|||||||.||||.|.:||.|||.||.||||||||||||||||||||||||||||
 Worm     5 GD-LNIDNLITRLLEVRGCRPGKPVTMSEAEIRALCHKSREIFLSQPILLELEAPLKICGDIHGQ 68

  Fly    67 YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFLLRGNHECASINRI 131
            |.||||||||||||||:||||||||||||||||||||||||||:||.||||||||||||||||||
 Worm    69 YNDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRI 133

  Fly   132 YGFYDECKRRYSIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLTSMEQIRRIMRPTDVPDQ 196
            ||||||||||:||||||||||||||||:||::|||||||||||||||.:||||||:||||||||.
 Worm   134 YGFYDECKRRFSIKLWKTFTDCFNCLPIAALIDEKIFCCHGGLSPDLQNMEQIRRVMRPTDVPDT 198

  Fly   197 GLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLQKHEFDLICRAHQVVEDGYEFFAKRML 261
            ||||||||||||||..||||||||||||||.:||||||.:|:.||||||||||||||||||||.|
 Worm   199 GLLCDLLWSDPDKDVTGWGENDRGVSFTFGPDVVAKFLNRHDLDLICRAHQVVEDGYEFFAKRQL 263

  Fly   262 VTLFSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPADKRKK 302
            |||||||||||||||||.|||||:|||||||||||::|:.|
 Worm   264 VTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAK 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-87BNP_524937.1 MPP_PP1_PPKL 6..296 CDD:277359 256/289 (89%)
gsp-1NP_001256250.1 MPP_PP1_PPKL 8..298 CDD:277359 256/289 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 1 1.010 - - D327461at33208
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100222
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X337
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.830

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