DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-87B and Ppp6c

DIOPT Version :10

Sequence 1:NP_524937.1 Gene:Pp1-87B / 49260 FlyBaseID:FBgn0004103 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_598273.2 Gene:Ppp6c / 171121 RGDID:708460 Length:305 Species:Rattus norvegicus


Alignment Length:260 Identity:121/260 - (46%)
Similarity:170/260 - (65%) Gaps:4/260 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LSEGEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYV 92
            |.|.:::.||....::.|.:..:..:..|:.:|||||||:|||..||..||..|::||:|:||:|
  Rat    19 LPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFV 83

  Fly    93 DRGKQSLETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRY-SIKLWKTFTDCFNC 156
            |||..||||...|||.|.|:.:...|||||||...|.::|||||||:.:| :...|:..|..|:.
  Rat    84 DRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCTKVFDM 148

  Fly   157 LPVAAIVDEKIFCCHGGLSPDLTSMEQIRRIMRPTDVPDQGLLCDLLWSDP-DKDTMGWGENDRG 220
            |.|||::||:|.|.|||||||:.:::|||.|.|..::|.:|..|||:|||| |.||  |..:.||
  Rat   149 LTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSDPEDVDT--WAISPRG 211

  Fly   221 VSFTFGAEVVAKFLQKHEFDLICRAHQVVEDGYEFFAKRMLVTLFSAPNYCGEFDNAGAMMSVDD 285
            ..:.|||:|..:|:..:...|||||||:|.:||:|.....|||::||||||....|..::|...|
  Rat   212 AGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKD 276

  Fly   286  285
              Rat   277  276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-87BNP_524937.1 MPP_PP1_PPKL 6..296 CDD:277359 121/260 (47%)
Ppp6cNP_598273.2 MPP_PP2A_PP4_PP6 5..289 CDD:277360 121/260 (47%)

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