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Protein Alignment rnf24 and C18B12.4
DIOPT Version :9
Sequence 1: | XP_005160122.1 |
Gene: | rnf24 / 492480 |
ZFINID: | ZDB-GENE-041114-40 |
Length: | 157 |
Species: | Danio rerio |
Sequence 2: | NP_510498.1 |
Gene: | C18B12.4 / 181600 |
WormBaseID: | WBGene00007666 |
Length: | 456 |
Species: | Caenorhabditis elegans |
Alignment Length: | 168 |
Identity: | 47/168 - (27%) |
Similarity: | 80/168 - (47%) |
Gaps: | 27/168 - (16%) |
- Green bases have known domain annotations that are detailed below.
Zfish 2 IYLPVLSMT-----------SDLQHYSFRMP-NIGFQNL-----PLNIYIVVFGTAIFVFILSLL 49
:.:|||.:: ||...|..|:. :.|:..| |. :.::||..|:|:..|.:.
Worm 149 VNIPVLMISHACKEEIAKKFSDTAGYRLRVRIDPGYYELFRYLIPF-LVVIVFCFALFLITLCVR 212
Zfish 50 FCCYLIRLRHQAHKELYAYKQVIQKEKVKELNL---HEICAVCLEEFKQKDELGICPCKHAFHRK 111
.|.. |.:.:|...: |:.::|..||:..| .:.||:|||.|...::|...||:|.||..
Worm 213 GCVE----RRKLNKRRLS-KRNLKKIPVKKYRLGDDPDTCAICLESFASGEKLRHLPCRHVFHCN 272
Zfish 112 CLIKWL-EVRKVCPLCNMPVLQLAQQQSMSEPIAPTQQ 148
|:..|| :.||:||||...:...:..:..:..:|.|.|
Worm 273 CIDVWLTQTRKICPLCKRKIGTDSDSECSTNDLASTSQ 310
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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