Protein Alignment rnf24 and C18B12.4

DIOPT Version :9

• Sequence 1: XP_005160122.1
• Gene: rnf24 / 492480
• ZFINID: ZDB-GENE-041114-40
• Length: 157
• Species: Danio rerio
• Sequence 2: NP_510498.1
• Gene: C18B12.4 / 181600
• WormBaseID: WBGene00007666
• Length: 456
• Species: Caenorhabditis elegans
• Alignment Length: 168
• Identity: 47/168 - (27%)
• Similarity: 80/168 - (47%)
• Gaps: 27/168 - (16%)

Zfish     2 IYLPVLSMT-----------SDLQHYSFRMP-NIGFQNL-----PLNIYIVVFGTAIFVFILSLL 49
            :.:|||.::           ||...|..|:. :.|:..|     |. :.::||..|:|:..|.:.
 Worm   149 VNIPVLMISHACKEEIAKKFSDTAGYRLRVRIDPGYYELFRYLIPF-LVVIVFCFALFLITLCVR 212

Zfish    50 FCCYLIRLRHQAHKELYAYKQVIQKEKVKELNL---HEICAVCLEEFKQKDELGICPCKHAFHRK 111
            .|..    |.:.:|...: |:.::|..||:..|   .:.||:|||.|...::|...||:|.||..
 Worm   213 GCVE----RRKLNKRRLS-KRNLKKIPVKKYRLGDDPDTCAICLESFASGEKLRHLPCRHVFHCN 272

Zfish   112 CLIKWL-EVRKVCPLCNMPVLQLAQQQSMSEPIAPTQQ 148
            |:..|| :.||:||||...:...:..:..:..:|.|.|
 Worm   273 CIDVWLTQTRKICPLCKRKIGTDSDSECSTNDLASTSQ 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rnf24	XP_005160122.1	zf-RING_2	84..126	CDD:290367	19/42 (45%)
C18B12.4	NP_510498.1	PA	<74..176	CDD:333703	6/26 (23%)
		HRD1	<223..>335	CDD:227568	29/89 (33%)
		RING-H2_RNF103	246..291	CDD:319387	21/44 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910