DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rnf24 and rnf24

DIOPT Version :10

Sequence 1:XP_005160122.1 Gene:rnf24 / 492480 ZFINID:ZDB-GENE-041114-40 Length:157 Species:Danio rerio
Sequence 2:XP_031751089.1 Gene:rnf24 / 100485988 XenbaseID:XB-GENE-944529 Length:158 Species:Xenopus tropicalis


Alignment Length:149 Identity:130/149 - (87%)
Similarity:133/149 - (89%) Gaps:1/149 - (0%)


- Green bases have known domain annotations that are detailed below.


Zfish     9 MTSDLQHYSFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQAHKELYAYKQVIQ 73
            |:.|.||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||.
 Frog    11 MSPDFQHYSFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQARKELYAYKQVIL 75

Zfish    74 KEKVKELNLHEICAVCLEEFKQKDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQQQS 138
            |||||||||:|||||||||||.||||||||||||||||||||||||||||||||||||||||..|
 Frog    76 KEKVKELNLYEICAVCLEEFKPKDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQLHS 140

Zfish   139 MSEPIAPTQQHLPGVENLV 157
            ..|. .|.|..|||.||:|
 Frog   141 NQEH-GPPQGPLPGAENIV 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnf24XP_005160122.1 RING-H2_RNF24 84..137 CDD:438337 51/52 (98%)
rnf24XP_031751089.1 RING-H2_RNF24 86..138 CDD:438337 50/51 (98%)

Return to query results.
Submit another query.