DRSC/TRiP Functional Genomics Resources

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Protein Alignment rec and MCM6

DIOPT Version :10

Sequence 1:NP_732072.1 Gene:rec / 49241 FlyBaseID:FBgn0003227 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_001331629.1 Gene:MCM6 / 834492 AraportID:AT5G44635 Length:857 Species:Arabidopsis thaliana


Alignment Length:800 Identity:193/800 - (24%)
Similarity:328/800 - (41%) Gaps:216/800 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 YAAPEDGLQVQSIAVDNPRAYSGWRLYFLREKYEEGNELATRIMAVEAYYQRNPHT--------- 147
            :...|..:||:::.::           ||:....:.|:       .|.||:.....         
plant     7 FVMDEQAIQVENVFLE-----------FLKSFRLDANK-------PELYYEAEIEAIRGGESTMM 53

  Fly   148 ---FDFVMIRDRGFFPLCAAGIKSDAQLKEVWPSLSEDIREHP-LRTLGTLSLAMHTVVVNHQLD 208
               |..||    ||         :||..|.:   ..|.:|..| ||.    :.....:.:|....
plant    54 YIDFSHVM----GF---------NDALQKAI---ADEYLRFEPYLRN----ACKRFVIEMNPSFI 98

  Fly   209 CNDSTTAMVSTPEQ------YVLP-TPRVRKIYARPDDFVPVESIEGISHSRVDTLFSIRGFVSN 266
            .:|       ||.:      |.|| |.|:|:                ::.:.:..|.|:.|.|:.
plant    99 SDD-------TPNKDINVSFYNLPFTKRLRE----------------LTTAEIGKLVSVTGVVTR 140

  Fly   267 VGEPSYSLTWQAFRCSRCQMEIAMRQRGTFQPRPYQCKRSECVARDEFVPLRSSPYTRLSIRQII 331
            ..|....|.:..|:|..|...|...::.....:|..|....|:.|..:..||..  ::.:..|.:
plant   141 TSEVRPELLYGTFKCLDCGSVIKNVEQQFKYTQPTICVSPTCLNRARWALLRQE--SKFADWQRV 203

  Fly   332 RVEESSLNLVHDFETSMPAEMDVELRHDLVDAVRVGQEVVVTG-ILKLQELGDDTTTG------- 388
            |::|:|..:.   ..|:|..:||.|||::|:..|.|..|:.|| ::.:.::......|       
plant   204 RMQETSKEIP---AGSLPRSLDVILRHEIVEQARAGDTVIFTGTVVVIPDISALAAPGERAECRR 265

  Fly   389 DTSNQMQPY--------LKAVSIRD--------ASSI----------------------KREFSE 415
            |:|.|....        |||:.:||        |:|:                      :::|:.
plant   266 DSSQQKSSTAGHEGVQGLKALGVRDLSYRLAFIANSVQIADGSRNTDMRNRQNDSNEDDQQQFTA 330

  Fly   416 RDLEAIVMINAEPNSFKLLVQSIAPEVYGHELPKAACLLSLLGGKGAETEA-------INVLLVG 473
            .:|:.|..:...|:.|..||.|:||.|:||:..|.|.||.||||....|..       |||.:||
plant   331 EELDEIQQMRNTPDYFNKLVGSMAPTVFGHQDIKRAVLLMLLGGVHKTTHEGINLRGDINVCIVG 395

  Fly   474 DPGIGKTKILQSCAQIAERGAHVSGKRGAQSAQQLGVTFAGR---NKRVLQAGSLMMASGGGHCT 535
            ||...|::.|:..|.|..|..:.|||  :.||..|..|.|..   .:..::||:||:|. .|.|.
plant   396 DPSCAKSQFLKYTAGIVPRSVYTSGK--SSSAAGLTATVAKEPETGEFCIEAGALMLAD-NGICC 457

  Fly   536 LDDVDKLASK-QAVLLQCLQSEEVNLPLAGAFASFPAQPSVIACANPQRGQYDEGRYLLQNINIS 599
            :|:.||:..| |..:.:.::.:.:::..||..|:..|:.|::|.|||..|:||:.:.|..|:|:.
plant   458 IDEFDKMDIKDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPVGGRYDKSKPLKYNVNLP 522

  Fly   600 PSLLREFHLVYILLDKPSE-RDMSLTAHVRALHAGARKRARIAARYALKPKMSDSMCEVSLNVPA 663
            |::|..|.|||:::|.|.| .|..:..|:..:|   :|.     ..||.|:.:            
plant   523 PAILSRFDLVYVMIDDPDEVTDYHIAHHIVRVH---QKH-----EAALSPEFT------------ 567

  Fly   664 AGKDDDTIKTEDDNDSIMQQDYDLDKRLEVLPEEGDLDLLPPILIKKFLSYARQELNPVLNEDAS 728
                                                     .:.:|::::||: .|.|.|:.:|.
plant   568 -----------------------------------------TVQLKRYIAYAK-TLKPKLSPEAR 590

  Fly   729 NAVLRYFLEL-KGSCNLDEDVSSQIGAGQLLAIIHLSQARARLDLSHVVSPQHVRDVIALLTESI 792
            ..::..::.| :|.......|:.::...||.|:|.||:|.||..|..:|.|.||...:.||..|:
plant   591 KLLVESYVALRRGDTTPGTRVAYRMTVRQLEALIRLSEAIARSHLEILVKPSHVLLAVRLLKTSV 655

  Fly   793 TQTSLKEG----SSRQGTRG 808
              .|::.|    |..|...|
plant   656 --ISVESGDIDLSEYQDANG 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
recNP_732072.1 Mcm2 177..799 CDD:440854 172/688 (25%)
MCM8 433..791 CDD:350665 106/370 (29%)
MCM8_WHD 819..883 CDD:439328
MCM6NP_001331629.1 MCM_N 17..113 CDD:464206 23/140 (16%)
MCM 116..656 CDD:475121 159/627 (25%)
MCM6_C 711..856 CDD:465688
Blue background indicates that the domain is not in the aligned region.

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