DRSC/TRiP Functional Genomics Resources

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Protein Alignment rec and Mcm9

DIOPT Version :9

Sequence 1:NP_001262615.1 Gene:rec / 49241 FlyBaseID:FBgn0003227 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_082106.3 Gene:Mcm9 / 71567 MGIID:1918817 Length:1134 Species:Mus musculus


Alignment Length:587 Identity:129/587 - (21%)
Similarity:228/587 - (38%) Gaps:174/587 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 FRCSRCQ----MEIAMRQRGTFQPRPYQC--------KRSECVARDEFVPLRSSPYTRLSIRQII 331
            :.|::|:    :|....|..||. ||..|        .:..|::.....|.|...|..:.|::  
Mouse   145 YMCNKCKHVFMVEADFEQYYTFS-RPSSCPSLASCDSSKFSCLSDLSSSPARCRDYQEIKIQE-- 206

  Fly   332 RVEESSLNLVHDFETSMPAEMDVELRHDLVDAVRVGQEVVVTGILKLQELGDDTTTGDTSNQMQP 396
            :|:..|:.       |:|..|.|.|..||||:.:.|.::.:.|::              ..:.:|
Mouse   207 QVQRLSVG-------SIPRSMKVILEDDLVDSCKSGDDLTIYGVV--------------MQRWKP 250

  Fly   397 YLKAVSIRDASSIKREFSERDLEAIVMINAEPNSFKL--------------------------LV 435
            :.:.|.......:|..:        |.:|.|.:|..:                          ::
Mouse   251 FQRDVRCEVEIVLKANY--------VQVNNEQSSGMVMDEDTRKEFEDFWEHYKSDPFAGRNEIL 307

  Fly   436 QSIAPEVYGHELPKAACLLSLLGGKGAETEAI--------NVLLVGDPGIGKTKILQSCAQIAER 492
            .|:.|:|:|..|.|.|..:.|.||. ..|:|.        ::|||||||.||::.|:..|:|..|
Mouse   308 ASLCPQVFGMYLVKLAVAMVLAGGI-QRTDAAGTRVRGESHLLLVGDPGTGKSQFLKYAAKITPR 371

  Fly   493 GAHVSGKRGAQSAQQLGVTFAGRNKRV--------LQAGSLMMASGGGHCTLDDVDKLASKQAVL 549
            ....:|         :|.|.||.....        |:||:|::|. .|.|.:|:.:.|.......
Mouse   372 SVLTTG---------IGSTSAGLTVTAVKDSGEWNLEAGALVLAD-AGLCCIDEFNSLKEHDRTS 426

  Fly   550 L-QCLQSEEVNLPLAGAFASFPAQPSVIACANPQRGQYDEGRYLLQNINISPSLLREFHLVYILL 613
            : :.::.:.:::..||.......:.:::|..|| :||||....:..||.:...||..|.||.:||
Mouse   427 IHEAMEQQTISVAKAGLVCKLNTRTTILAATNP-KGQYDPKESVSVNIALGSPLLSRFDLVLVLL 490

  Fly   614 DKPSERDMSLTAHVRALHAGARKRARIAARYALKPKMSDSMCEVSLNVPAAGKDDDTIKTEDDND 678
            |..:| |..                ||.:.:.|:.|...|..|   |:                 
Mouse   491 DTRNE-DWD----------------RIISSFILENKGYPSKSE---NL----------------- 518

  Fly   679 SIMQQDYDLDKRLEVLPEEGDLDLLPPILIKKFLSYARQELNPVLNEDASNAVLRYFLELKGSCN 743
                  :.::|                  :|.:....| .|:|.|:|.::..:|||:...:.|  
Mouse   519 ------WSMEK------------------MKTYFCLIR-NLHPTLSEVSNQVLLRYYQMQRQS-- 556

  Fly   744 LDEDVSSQIGAGQLLAIIHLSQARARLDLSHVVSPQHVRDVIALLTESITQTSLKEGSSRQGTRG 808
             |...:::.....|.::|.|::|.|||.....|:          |.:::|..|:.|.|.:.|...
Mouse   557 -DSRNAARTTIRLLESLIRLAEAHARLMFRSAVT----------LEDAVTAVSVMESSMQGGALL 610

  Fly   809 GG 810
            ||
Mouse   611 GG 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
recNP_001262615.1 RNR_PFL <117..200 CDD:299130
MCM 243..792 CDD:214631 122/567 (22%)
P-loop_NTPase 468..606 CDD:304359 40/146 (27%)
Mcm9NP_082106.3 Mcm2 10..605 CDD:224162 126/578 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 659..1101
DUF4045 <739..>1004 CDD:330572
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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