DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rec and mcm6l

DIOPT Version :9

Sequence 1:NP_001262615.1 Gene:rec / 49241 FlyBaseID:FBgn0003227 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_001020704.1 Gene:mcm6l / 564982 ZFINID:ZDB-GENE-050913-141 Length:824 Species:Danio rerio


Alignment Length:844 Identity:195/844 - (23%)
Similarity:326/844 - (38%) Gaps:225/844 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 SDAQLKEVWPSLSEDIREHPLRTLGTLSLAMHTVV-VNHQLDCNDSTTAMVSTPEQY--VLP--- 226
            ||||         |.||  |.|  .||:::...:. .|.||    :||..    |:|  |.|   
Zfish    42 SDAQ---------ELIR--PER--NTLTVSFSNIEHYNQQL----ATTIQ----EEYYRVYPFLC 85

  Fly   227 ------------TPRVRKIYARPDDFVPVESIEGISHSRVDTLFSIRGFVSNVGEPSYSLTWQAF 279
                        .|..::.|....:|...:.|..:|..|:.||..|.|.|.........|....|
Zfish    86 RAVRHFARDHGNIPPSKEFYVAFSEFPSRQKIRELSTVRIGTLLRISGQVVRTHPVHPELVSGTF 150

  Fly   280 RCSRCQMEIAMRQRGTFQPRPYQCKRSECVARDEFVPLRSSPYTRLSIRQIIRVEESSLNLVHDF 344
            .|..||..|...::.....:|..||...|..|..|  :..:..:|....|..|::|:...|... 
Zfish   151 LCLDCQSVIKDVEQQFKYTQPTICKNPVCANRRRF--MLDTNKSRFVDFQKGRIQETQAELPRG- 212

  Fly   345 ETSMPAEMDVELRHDLVDAVRVGQEVVVTGIL----KLQELGDDTTTGDTSNQMQ---------- 395
              |:|..::|.||.:.|:..:.|.....||.|    .:..:....|..:||:::.          
Zfish   213 --SIPRSVEVILRAEAVETAQAGDRCDFTGTLVVVPDVSAMALAGTRAETSSRVTGKEGFETDGI 275

  Fly   396 PYLKAVSIRD------------------------------ASSIKREFSERDLEAIVMINAEPNS 430
            ..|||:.:|:                              |.|:|.:.:..:.|.:..::.:.|.
Zfish   276 QGLKALGVRELSYRLAFLANYVAPTNPRFGGKELRQEDQTAESVKNQMTVLEWEKVFEMSQDKNL 340

  Fly   431 FKLLVQSIAPEVYGHELPKAACLLSLLGGKGAETEA-------INVLLVGDPGIGKTKILQSCAQ 488
            :..|..|:.|.::|::..|...||.|.||....|..       |||.:||||...|::.|:....
Zfish   341 YHNLCTSLFPTIHGNDEIKRGILLMLFGGVAKTTMEGTSLRGDINVCIVGDPSTSKSQFLKHVED 405

  Fly   489 IAERGAHVSGKRGAQSAQQLGVTFA-----GRNKRVLQAGSLMMASGGGHCTLDDVDKLASK-QA 547
            .|.|..:.|||  |.||  .|:|.|     ..::.|::||:||:|. .|.|.:|:.||:..| |.
Zfish   406 FAPRAVYTSGK--ASSA--AGLTAAVVKDEESHEFVIEAGALMLAD-NGVCCIDEFDKMDLKDQV 465

  Fly   548 VLLQCLQSEEVNLPLAGAFASFPAQPSVIACANPQRGQYDEGRYLLQNINISPSLLREFHLVYIL 612
            .:.:.::.:.:::..||..|:..|:.|::|.|||..|:|:..:.|.||:|:|..::..|.|.:||
Zfish   466 AIHEAMEQQTISITKAGVKATLNARTSILAAANPIDGRYNRAKSLKQNVNMSAPIMSRFDLFFIL 530

  Fly   613 LDKPSE-RDMSLTAHVRALHAGARKRARIAARYALKPKMSDSMCEVSLNVPAAGKDDDTIKTEDD 676
            :|:.:| .|.::...:..|||                                           .
Zfish   531 VDECNEVTDYAIARRIVDLHA-------------------------------------------R 552

  Fly   677 NDSIMQQDYDLDKRLEVLPEEGDLDLLPPILIKKFLSYARQELNPVLNEDASNAVLRYFLELKGS 741
            |...:::.|..|:                  |::::.:||| ..|.:..:|...|:..:..|:..
Zfish   553 NVESVERVYSTDE------------------IQRYILFARQ-FQPKITVEAQEFVVDQYKRLRQR 598

  Fly   742 CNLDEDVSS-QIGAGQLLAIIHLSQARARLDLSHVVSPQHVRDVIALLTESITQTSLKE------ 799
            .......|: :|...||.:::.||:..|||..|..|.|:||::...||.:||.:....:      
Zfish   599 DGGGTTKSAWRITVRQLESMLRLSEGMARLYCSDEVQPKHVKEAFRLLNKSIIRVDSPDINFDQE 663

  Fly   800 -------------GSSRQGTRGGGGAG----------------GGAGKSAQLRNFLELTKRRSAA 835
                         |...:|..||...|                ..|.|.|...:|.|. ||.|..
Zfish   664 HDEDNINDQNELFGKETEGQNGGDVNGHAVEDMETDQTEKPEKPAAAKPALRMSFAEY-KRVSNL 727

  Fly   836 L---GRRIFEFDE-------------LKEIGTRAGILTGFSQLVEMANLGGYLLMKGANMYEVV 883
            |   .:::.:.||             ||||.:.   :...::||...||...:|.:..|...::
Zfish   728 LVLHMQKMEQLDEDSSLKKSELINWYLKEIESE---IDSEAELVAKKNLIERVLYRLINFDHII 788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
recNP_001262615.1 RNR_PFL <117..200 CDD:299130 11/31 (35%)
MCM 243..792 CDD:214631 144/607 (24%)
P-loop_NTPase 468..606 CDD:304359 48/143 (34%)
mcm6lNP_001020704.1 MCM_N 23..133 CDD:291233 29/111 (26%)
MCM 116..651 CDD:214631 145/606 (24%)
P-loop_NTPase <441..528 CDD:304359 29/87 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 1 1.000 - - FOG0001226
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.