DRSC/TRiP Functional Genomics Resources

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Protein Alignment rec and mcm2

DIOPT Version :10

Sequence 1:NP_732072.1 Gene:rec / 49241 FlyBaseID:FBgn0003227 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_001006772.1 Gene:mcm2 / 448458 XenbaseID:XB-GENE-999974 Length:884 Species:Xenopus tropicalis


Alignment Length:715 Identity:150/715 - (20%)
Similarity:291/715 - (40%) Gaps:162/715 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 KSDAQLKEVWPSLSEDIREHPLRTLGTLSLAMHTVVVNHQLD----------------------C 209
            :.|.::.|...:| ||::.|.:|.  .:|:|...:.:.|:..                      |
 Frog   147 EEDEEMIESIENL-EDMKGHTVRE--WVSMAATRLEIYHRFKNFLRTHVDEHGHNVFKEKISDMC 208

  Fly   210 NDSTTAMVSTPEQ---------YVLPT---------------------PR----VRKIYARPDDF 240
            .::..::|...|.         |.||.                     |:    .|:|:.|....
 Frog   209 KENKESLVVNYEDLAAREHVLAYFLPEAPAEMLKIFDEAAKEVVLVMYPKYDRIAREIHVRISHL 273

  Fly   241 VPVESIEGISHSRVDTLFSIRGFVSNVGEPSYSLTWQAFRCSRCQMEIAMRQRGTF------QPR 299
            ..||.:..:....::.|....|.|:........|:...:.|::|...:     |.|      :.:
 Frog   274 PLVEELRSLRQLHLNQLIRTSGVVTCCTGVLPQLSMVKYNCNKCNFIL-----GPFFQSQNQEVK 333

  Fly   300 PYQCKRSECVARDEF-VPLRSSPYTRLSIRQIIRVEESSLNLVHDFETSMPAEMDVELRHDLVDA 363
            |..|  .||.:...| :.:..:.|...   |.|.::||...:.   ...:|...|..|..||||:
 Frog   334 PGSC--PECQSLGPFEINMEETVYQNY---QRITIQESPGKVA---AGRLPRSKDAILLADLVDS 390

  Fly   364 VRVGQEVVVTGILKLQELGDDTTTGDTSNQMQPYLKA-----VSIRDASSIKREFSERDLEAIVM 423
            .:.|.|:.:||.......|    :.:|:|....:...     ::.:|......|.::.|::|||.
 Frog   391 CKPGDEIELTGTYHNNYDG----SLNTANGFPVFATVILANHITKKDDKVAVGELTDEDVKAIVA 451

  Fly   424 INAEPNSFKLLVQSIAPEVYGHELPKAACLLSLLGGK----GAETEA---INVLLVGDPGIGKTK 481
            ::.:....:.:..||||.:||||..|....|:|.||:    |.:.:.   |||||.||||..|::
 Frog   452 LSKDERIGERIFASIAPSIYGHEDIKRGLALALFGGEAKNPGGKHKVRGDINVLLCGDPGTAKSQ 516

  Fly   482 ILQSCAQIAERGAHVSGKRGAQSAQQLGVT-FAGRN----KRVLQAGSLMMASGGGHCTLDDVDK 541
            .|:...::|.|....:|    |.|..:|:| :..|:    :..|:||:|::|. .|.|.:|:.||
 Frog   517 FLKYVEKVASRAVFTTG----QGASAVGLTAYVQRHPVTKEWTLEAGALVLAD-RGVCLIDEFDK 576

  Fly   542 LASKQAVLL-QCLQSEEVNLPLAGAFASFPAQPSVIACANPQRGQYDEGRYLLQNINISPSLLRE 605
            :..:....: :.::.:.:::..||...|..|:.::||.:||..|:||......:|::::..::..
 Frog   577 MNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTIIAASNPIGGRYDPSLTFSENVDLTEPIVSR 641

  Fly   606 FHLVYILLD--KPSERDMSLTAHVRALHAGARKRARIAARYALKPKMSDSMCEVSLNVPAAGKDD 668
            |.::.::.|  .|.:.:|                   .||:.           |..::.......
 Frog   642 FDILCVVRDTVDPVQDEM-------------------LARFV-----------VGSHIKHHPSSK 676

  Fly   669 DTIKTEDDNDSIMQQDYDLDKRLEVLPEEGDLDLLPPILIKKFLSYARQELNPVLNEDASNAVLR 733
            |....|:                ..||....::.||..::||::.|::::::|.||:...:.|.:
 Frog   677 DIANGEE----------------FALPNTFGVEPLPQEVLKKYIMYSKEKIHPKLNQMDQDKVAK 725

  Fly   734 YFLELKGSCNLDEDV---SSQIGAGQLLAIIHLSQARARLDLSHVVSPQHVRDVIALLTESITQT 795
            .:.:|:     .|.:   |..|....:.::|.:::|.||:.|...|....|...|.::.||...|
 Frog   726 MYSDLR-----KESMATGSIPITVRHIESMIRMAEAHARMHLRDYVVEDDVNMAIRVMLESFIDT 785

  Fly   796  795
             Frog   786  785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
recNP_732072.1 Mcm2 177..799 CDD:440854 148/705 (21%)
MCM8 433..791 CDD:350665 87/375 (23%)
MCM8_WHD 819..883 CDD:439328
mcm2NP_001006772.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..61
MCM2_N 56..167 CDD:403724 6/20 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..151 1/3 (33%)
MCM_N 182..272 CDD:464206 11/89 (12%)
MCM 276..783 CDD:214631 129/579 (22%)
Arginine finger 640..643 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.

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