DRSC/TRiP Functional Genomics Resources

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Protein Alignment rec and Mcm5

DIOPT Version :9

Sequence 1:NP_001262615.1 Gene:rec / 49241 FlyBaseID:FBgn0003227 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster


Alignment Length:730 Identity:162/730 - (22%)
Similarity:292/730 - (40%) Gaps:170/730 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 SLSEDIREHPLRTLGTLSLAMHTVVVNHQLDCNDSTTAMVSTPEQYVLPTPRVRKIYARPDDFVP 242
            :|::.:.:.|...|.....|...|.        |..||.....|:::.....:....|.|     
  Fly    78 TLADKLNKQPTEHLEIFEEAAREVA--------DEITAPRPEHEEHMHDIQILLSSNANP----- 129

  Fly   243 VESIEGISHSRVDTLFSIRGFV---SNVGEPSYSLTWQAFRCS-------------------RCQ 285
             .:|..:....|..|..|.|.:   |.:...:..::.|...||                   :|.
  Fly   130 -TNIRQLKSDCVSKLVKIAGIIVAASGISAKATRMSIQCLSCSTVIPNLKVNPGLEGYALPRKCN 193

  Fly   286 MEIAMRQRGTFQP---RPYQCKRSECVARDEFVPLRSSPYTRLSIRQIIRVEESSLNLVHDF--E 345
            .|.|.|.:....|   .|.:||   ||   :|              |.::::|     :.||  :
  Fly   194 TEQAGRPKCPLDPFFIMPDKCK---CV---DF--------------QTLKLQE-----LPDFVPQ 233

  Fly   346 TSMPAEMDVELRHDLVDAVRVGQEVVVTGILKLQELGDDTTTGDTSNQM----QPYLKAVSI--- 403
            ..:|..:.:.....|.:.|..|..|::.||..::::|..:........:    .||::.|.|   
  Fly   234 GEIPRHLQLFCDRSLCERVVPGNRVLIQGIYSIRKVGKPSRRDGREKAVVGVRAPYMRVVGITVD 298

  Fly   404 -RDASSIKR--EFSERDLEAIVMINAEPNSFKLLVQSIAPEVYGHELPKAACLLSLLGGKG---- 461
             ..|.:|.|  ..:..:.|....:.|..:.::.|.||:||.::|....|.|....|.||..    
  Fly   299 SEGAGAISRYSNITSDEEEHFRRMAASGDIYERLSQSLAPSIFGSRDIKKAITCMLFGGSRKRLP 363

  Fly   462 ---AETEAINVLLVGDPGIGKTKILQSCAQIAERGAHVSGKRGAQSAQQLGVTFA------GRNK 517
               .....|||||:||||..|:::|:...::|....:.||| |:.:|   |:|.:      .|| 
  Fly   364 DGLCRRGDINVLLLGDPGTAKSQLLKFVEKVAPIAVYTSGK-GSSAA---GLTASVMKDPQTRN- 423

  Fly   518 RVLQAGSLMMASGGGHCTLDDVDKLASKQAVLL-QCLQSEEVNLPLAGAFASFPAQPSVIACANP 581
            .|::.|::::|.||..| :|:.||:.....|.: :.::.:.:::..||...:..::.||:|.||.
  Fly   424 FVMEGGAMVLADGGVVC-IDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANS 487

  Fly   582 QRGQYDE--GRYLLQNINISPSLLREFHLVYILLDKPSE-RDMSLTAHVRALHAGARKRARIAAR 643
            ..|::|:  |.   :||:..|::|..|.:::|:.|...| ||::|..|:..:|..:.|.|     
  Fly   488 IFGRWDDTKGE---ENIDFMPTILSRFDMIFIVKDIHDESRDITLAKHIINVHLSSNKSA----- 544

  Fly   644 YALKPKMSDSMCEVSLNVPAAGKDDDTIKTEDDNDSIMQQDYDLDKRLEVLPEEGDLDLLPPILI 708
                              |:.                              |.||::.|   ...
  Fly   545 ------------------PSE------------------------------PAEGEISL---STF 558

  Fly   709 KKFLSYARQELNPVLNEDASNAV-LRYFLELKGSCN----LDEDVSSQIGAGQLLAIIHLSQARA 768
            ||::.|.|....|.|:|.|...: .||.|...|:..    .|:.:|..|...||.|:|.:|::.|
  Fly   559 KKYIHYCRTHCGPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPITVRQLEAVIRISESLA 623

  Fly   769 RLDLSHVVSPQHVRDVIALLTESITQTSLKEGSSRQGTRGGGGAGGGAGKSAQLRNFLELTKRRS 833
            ::.|....:.:||.:.:.|...| |..:...||.      .|..|....:..:..|.:|...:|.
  Fly   624 KIRLQPFATDEHVNEALRLFQVS-TLDAAMTGSL------AGAEGFTTEEDQETLNRIEKQLKRR 681

  Fly   834 AALGRRIFEFDELKE 848
            .|:|.::.|.:.|::
  Fly   682 FAIGSQVSEQNILQD 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
recNP_001262615.1 RNR_PFL <117..200 CDD:299130 4/21 (19%)
MCM 243..792 CDD:214631 138/607 (23%)
P-loop_NTPase 468..606 CDD:304359 44/146 (30%)
Mcm5NP_524308.2 MCM_N 31..124 CDD:405270 9/53 (17%)
MCM 128..648 CDD:214631 140/616 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446140
Domainoid 1 1.000 52 1.000 Domainoid score I661
eggNOG 1 0.900 - - E1_COG1241
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11630
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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