DRSC/TRiP Functional Genomics Resources

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Protein Alignment rec and mcm7

DIOPT Version :10

Sequence 1:NP_732072.1 Gene:rec / 49241 FlyBaseID:FBgn0003227 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_998877.1 Gene:mcm7 / 407945 XenbaseID:XB-GENE-5946446 Length:720 Species:Xenopus tropicalis


Alignment Length:753 Identity:170/753 - (22%)
Similarity:310/753 - (41%) Gaps:156/753 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 PRAYSGWR---LYFLREKYEE----------GNELA--------TRIMAVEAYYQRNPHTFDFVM 152
            ||.|...:   ..||:|.|::          |.:||        ...:.::...:.:|...|.:.
 Frog     2 PRDYQAEKEKCKTFLQEFYKDDELGKKNFKYGVQLANIAHREQVALYIDLDDLAEEDPELVDAIC 66

  Fly   153 IRDRGFFPLCAAGIKSDAQLKEVWPSLSEDIREHPLRTLGTLSLAMH----TVVVNHQLDCNDST 213
            ...|.:..|.|     || ::|:.|...|  ||           .:|    .|.:.|:|......
 Frog    67 ENTRRYTNLFA-----DA-VQELLPQYKE--RE-----------VVHKDALDVYIEHRLMMEQRG 112

  Fly   214 TAMVSTPE---QYVLPTPRVRKIYARPDDFVPVESIEGISHSRVDTLFSIRGFVSNVGEPSYSLT 275
            .....|.:   ||.....|..::|.:.........:..:....:..|.::||.|:.|.|....:.
 Frog   113 RDPSETRDPHNQYPPELMRRFELYFKAPSSSKARVVRDVKADSIGKLVTVRGIVTRVTEVKPMMV 177

  Fly   276 WQAFRCSRCQMEIAMR-QRGTFQPRPYQCKRSECVARDE----FVPLRSSPYTRLSIRQIIRVEE 335
            ...:.|.:|..|.... |..||.|. ..|...||.....    ::..|.|.:.:.   |.::::|
 Frog   178 VATYTCDQCGAETYQPIQSPTFMPL-IMCPSRECQTNRSGGRLYLQTRGSKFIKF---QELKIQE 238

  Fly   336 SSLNLVHDFET---SMPAEMDVELRHDLVDAVRVGQEVVVTGI-LKLQELGDDTTT----GDTSN 392
                  |..:.   ::|..|.|.:|.:.....:.|..|.:||: |.:...|.....    .:|..
 Frog   239 ------HSDQVPVGNIPRCMSVYVRGENTRLAQPGDHVSITGVFLPMLRTGFRQVVQGLLSETYL 297

  Fly   393 QMQPYLKAVSIRDASSIKREFSERDLEAIVMINAEPNSFKLLVQSIAPEVYGHELPKAACLLSLL 457
            :....:|.....|......|.||.:|..|    .|.:.::.|..|||||:||||..|.|.||.|:
 Frog   298 ESHRLVKMNKTEDDELGTEELSEEELRQI----TEEDFYEKLAASIAPEIYGHEDVKKALLLLLV 358

  Fly   458 GG-----KGAETEA-INVLLVGDPGIGKTKILQSCAQIAERGAHVSGKRGAQSAQQLGVTFAGRN 516
            ||     :|.:... ||:.|:||||:.|:::|....::|.|..:.:| ||:..   :|:|.|...
 Frog   359 GGVDNSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTG-RGSSG---VGLTAAVMK 419

  Fly   517 KRV-----LQAGSLMMASGGGHCTLDDVDKLA-SKQAVLLQCLQSEEVNLPLAGAFASFPAQPSV 575
            ..|     |:.|:|::|. .|.|.:|:.||:. :.:..:.:.::.:.:::..||...:..|:.|:
 Frog   420 DPVTGEMTLEGGALVLAD-QGVCCIDEFDKMMDTDRTAIHEVMEQQTISIAKAGIMTTLNARCSI 483

  Fly   576 IACANPQRGQYDEGRYLLQNINISPSLLREFHLVYILLDKPS-ERDMSLTAHVRALHAGARKRAR 639
            :|.|||..|:|:..:.:.|||.:..:||..|.|::::.|||. :.|:.|..|:..:|        
 Frog   484 LAAANPAYGRYNPKKTVEQNIQLPAALLSRFDLLWLIQDKPDRDNDLRLAQHITYVH-------- 540

  Fly   640 IAARYALKPKMSDSMCEVSLNVPAAGKDDDTIKTEDDNDSIMQQDYDLDKRLEVLPEEGDLDLLP 704
               :::.:|.                                .|...||.:              
 Frog   541 ---QHSKQPP--------------------------------SQFQPLDMK-------------- 556

  Fly   705 PILIKKFLSYARQELNPVLNEDASNAVLRYFLELKGSCNLDEDVSSQIGAGQLLAIIHLSQARAR 769
              |::::::..::: .|.:.|..::.:...::|::.....::|::. ..|..||:|:.||.|.||
 Frog   557 --LMRRYITMCKRK-QPAIPESLADYLTAAYVEMRKEARTNKDMTF-TSARTLLSILRLSTALAR 617

  Fly   770 LDLSHVVSPQHVRDVIALLTESITQTSLKEGSSRQGTR 807
            |.|..||..:.|.:.:. |||....:.|  |...|.:|
 Frog   618 LRLEDVVEKEDVNEAMR-LTEMSKDSLL--GDKGQTSR 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
recNP_732072.1 Mcm2 177..799 CDD:440854 149/654 (23%)
MCM8 433..791 CDD:350665 94/370 (25%)
MCM8_WHD 819..883 CDD:439328
mcm7NP_998877.1 MCM_N 9..102 CDD:464206 21/111 (19%)
MCM 144..640 CDD:214631 135/576 (23%)
Arginine finger 512..515 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.

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