DRSC/TRiP Functional Genomics Resources

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Protein Alignment rec and mei-218

DIOPT Version :10

Sequence 1:NP_732072.1 Gene:rec / 49241 FlyBaseID:FBgn0003227 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_728052.2 Gene:mei-218 / 3772646 FlyBaseID:FBgn0002709 Length:1186 Species:Drosophila melanogaster


Alignment Length:192 Identity:41/192 - (21%)
Similarity:76/192 - (39%) Gaps:42/192 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 PYLKAVSIRDASSIKREFSERDLEAIVMINAEPNSFKLL-------------VQSIAPEVYGHEL 447
            |..:.:..|..|...:|:.:.||      |..|:|.|.|             |.:::.::....:
  Fly   795 PLERHMIFRAPSQHGQEYPKPDL------NCVPSSIKKLHHLISSQYSDYSFVYALSAQISQDCV 853

  Fly   448 P-------KAACLLSLLGGKGAETEA-INVLLVGDPGIGKTKILQSCAQIAER--GAHVSGKRGA 502
            |       |...|.|::..:..|..| |::.::....:...::|....|:|.|  |.|..|    
  Fly   854 PMDCFVYLKMILLASIVSIESDEVRAPISLCIIATDSLMANRLLNKVGQLAPRFLGPHEYG---- 914

  Fly   503 QSAQQLGVTFAGRNKRV--LQAGSLMMASGGGHCTLDDVDKLASKQAVLLQ-CLQSEEVNLP 561
                 |..||.....|.  :.|..|::|..|.:.. .|.::|:..|...|: |:::..|.:|
  Fly   915 -----LQPTFNALPTRFNWIVASPLLLAQQGVYYA-GDWNRLSKDQGCQLEKCIENGAVPVP 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
recNP_732072.1 Mcm2 177..799 CDD:440854 41/192 (21%)
MCM8 433..791 CDD:350665 31/155 (20%)
MCM8_WHD 819..883 CDD:439328
mei-218NP_728052.2 PTZ00112 122..>417 CDD:240274
SP1-4_N <152..>287 CDD:425404
MCM 862..1116 CDD:475121 28/119 (24%)
MCM_lid 1044..1116 CDD:465534
Blue background indicates that the domain is not in the aligned region.

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