Sequence 1: | NP_001262615.1 | Gene: | rec / 49241 | FlyBaseID: | FBgn0003227 | Length: | 885 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001178734.2 | Gene: | Mcm3 / 316273 | RGDID: | 1305168 | Length: | 813 | Species: | Rattus norvegicus |
Alignment Length: | 683 | Identity: | 152/683 - (22%) |
---|---|---|---|
Similarity: | 280/683 - (40%) | Gaps: | 155/683 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 239 DFVPVESIEGISHSRVDTLFS--------------------------------------IRGFVS 265
Fly 266 NVGEPSYSLTWQAFRCSRCQMEIAMRQRGTF-----QPRPYQCKRSECVARDEFVPLRSS----- 320
Fly 321 --------PYTRLSIRQ-------IIRVEESS-----------------LNLVHDFET------- 346
Fly 347 ------SMPAEMDVELRHDLVDAVRVGQEVVVTGILKLQELGDDTTTGDTSNQMQPYLKAVSIRD 405
Fly 406 AS-SIKREFSERDLEAIVMIN--AEPNSFKLLVQSIAPEVYGHELPKAACLLSLLGGKGAETE-- 465
Fly 466 -----AINVLLVGDPGIGKTKILQSCAQIAERGAHVSGKRGAQSAQQLGVTFA-----GRNKRVL 520
Fly 521 QAGSLMMASGGGHCTLDDVDKLAS-KQAVLLQCLQSEEVNLPLAGAFASFPAQPSVIACANPQRG 584
Fly 585 QYDEGRYLLQNINISPSLLREFHLVYILLDK-PSERDMSLTAHVRALHAGARKRARIAARYALKP 648
Fly 649 KMSDSMCEVSLNVPAAGKDDDTIKTEDDNDSIMQQDYD-----LDKRLEVLPEEGDLDLLPPILI 708
Fly 709 KKFLSYARQELNPVLNEDASNAVLRYFLELKGSCNLDEDV--SSQIGAGQLLAIIHLSQARARLD 771
Fly 772 LSHVVSPQHVRDVIALLTESITQTSLKEGSSRQ 804 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rec | NP_001262615.1 | RNR_PFL | <117..200 | CDD:299130 | |
MCM | 243..792 | CDD:214631 | 148/665 (22%) | ||
P-loop_NTPase | 468..606 | CDD:304359 | 45/143 (31%) | ||
Mcm3 | NP_001178734.2 | MCM_N | 17..129 | CDD:291233 | 18/117 (15%) |
MCM | 109..654 | CDD:214631 | 136/572 (24%) | ||
P-loop_NTPase | 340..479 | CDD:304359 | 45/143 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1241 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D232729at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |