DRSC/TRiP Functional Genomics Resources

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Protein Alignment rec and mcm-7

DIOPT Version :10

Sequence 1:NP_732072.1 Gene:rec / 49241 FlyBaseID:FBgn0003227 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_504199.1 Gene:mcm-7 / 178831 WormBaseID:WBGene00003159 Length:730 Species:Caenorhabditis elegans


Alignment Length:721 Identity:154/721 - (21%)
Similarity:289/721 - (40%) Gaps:169/721 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 DGLQVQSIAVDNPRAYSGWRLYFLREKYEE--GNELATRIMAVEAYYQRNPHTFDFVMIRDRGFF 159
            |.|::......|.:.|.......:.:..::  |::.|..|.|::||..:..|     |.|:.|  
 Worm    67 DALELSEAITSNTKRYEVLFKDTISDMIQDYLGDKQAPVIDALDAYMFQRLH-----MDRNEG-- 124

  Fly   160 PLCAAGIKSDAQLKEVWPSLSEDIREHPLRTLGTLSLAMHTVVVNHQLDCNDSTTAMVSTPEQYV 224
                      |..:||  ||.:..:::|.:.|...                              
 Worm   125 ----------AANEEV--SLQDKRKKYPPQLLQRF------------------------------ 147

  Fly   225 LPTPRVRKIYARPDDFVPVESIEGISHSRVDTLFSIRGFVSNVGEPSYSLTWQAFRCSRCQMEIA 289
                   ::|...||......:..|..:.:..|.|::|.|....|....:....:.|..|..|:.
 Worm   148 -------EVYFTTDDAAHETCVRNIKATEIGHLVSMKGVVIRATEVKPCVEVMTYTCDTCAAEVY 205

  Fly   290 MRQRG-TFQPRPYQCKRSECVARDE----FVPLRSSPYTRLSIRQIIRVEESSLNLVHDFETSMP 349
            ...:| .|.| |..|...|||....    .:.||.|.:.:.   |.::::|.|..:.   ..|:|
 Worm   206 QPVKGMQFTP-PVNCPNKECVEAKANGRLHMQLRGSKFVKF---QELKIQELSEQVP---VGSIP 263

  Fly   350 AEMDVELRHDLVDAVRVGQEVVVTGI-LKLQELGDDTTTG---DTSNQMQPYLKA--VSIRDASS 408
            ..|.|.:..::......|..|.|:|: |.:.:.|...|.|   ||      ||:|  ::..|.:.
 Worm   264 RTMTVHVYGEMTRKCNTGNVVHVSGVFLPIMQSGFRPTGGLVADT------YLEAHYINNLDDNP 322

  Fly   409 IKREFSERDLEAIVMINAEPNSFKLLVQSIAPEVYGHELPKAACLLSLLGGKGAETE------AI 467
            ........:||   ::..:.::::.|..|||||::||...|...|::|:||....:.      .|
 Worm   323 TFNGVQSAELE---VLRRKGDNYETLAASIAPEIFGHVDVKKCLLMALVGGNDNSSNGMKIRGCI 384

  Fly   468 NVLLVGDPGIGKTKILQSCAQIAERGAHVSGKRGAQSAQQLGVTFAGRNKRV-----LQAGSLMM 527
            |||::||||:.|:::|....::|.|..:.:| ||:..   :|:|.|.....|     |:.|:|::
 Worm   385 NVLMMGDPGVAKSQLLGYVNRLAPRSQYTTG-RGSSG---VGLTAAVMKDPVTGEMSLEGGALVL 445

  Fly   528 ASGGGHCTLDDVDKLAS-KQAVLLQCLQSEEVNLPLAGAFASFPAQPSVIACANPQRGQYDEGRY 591
            |. ||.|.:|:.||:.. .:..:.:.::.:.:::..||...:..|:.::||.|||..|:|:..|.
 Worm   446 AD-GGICCIDEFDKMMDHDRTAIHEVMEQQTISIAKAGIMTTLNARTAIIAAANPAYGRYNPNRS 509

  Fly   592 LLQNINISPSLLREFHLVYILLDKPS-ERDMSLTAHVRALHAGARKRARIAARYALKPKMSDSMC 655
            :.||:::..:||..|.|:.::.||.. |.|..|..|:..:|...                    |
 Worm   510 IEQNVDLPAALLSRFDLILLMQDKADRENDKILAEHITYVHQHG--------------------C 554

  Fly   656 EVSLNVPAAGKDDDTIKTEDDNDSIMQQDYDLDKRLEVLPEEGDLDLLPPILIKKFLSYAR---Q 717
            .                                      |.....||:....:::::|..:   .
 Worm   555 H--------------------------------------PNREKKDLISLETLREYISLCKTYTP 581

  Fly   718 ELNPVLNEDASNAVLRYFLELKGSCNLDEDVSSQIGAGQLLAIIHLSQARARLDLSHVVSPQHVR 782
            .::|.|.|    .::..::|::.......| .:.:....:|.|:.::.|||:|.||.:|....|.
 Worm   582 TVDPALRE----RIVEAYVEMRRDARYSSD-PTFVSPRMILGIVRMATARAKLRLSTIVDESDVE 641

  Fly   783 DVIALL 788
            :.:.|:
 Worm   642 EALRLM 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
recNP_732072.1 Mcm2 177..799 CDD:440854 137/639 (21%)
MCM8 433..791 CDD:350665 87/372 (23%)
MCM8_WHD 819..883 CDD:439328
mcm-7NP_504199.1 MCM_N 14..107 CDD:464206 6/39 (15%)
MCM 162..651 CDD:475121 130/570 (23%)
Blue background indicates that the domain is not in the aligned region.

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