DRSC/TRiP Functional Genomics Resources

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Protein Alignment rec and Mcm7

DIOPT Version :9

Sequence 1:NP_001262615.1 Gene:rec / 49241 FlyBaseID:FBgn0003227 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_032594.1 Gene:Mcm7 / 17220 MGIID:1298398 Length:719 Species:Mus musculus


Alignment Length:712 Identity:166/712 - (23%)
Similarity:299/712 - (41%) Gaps:133/712 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 VVVNHQL--DCNDSTTAMVSTPE-QYVLPTPRVRKIYARPDDFVPVESIEGISHSRVDTLFSIRG 262
            |.:.|:|  :........|..|: ||.....|..::|.|.........|..:....|..|.::||
Mouse   101 VYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRG 165

  Fly   263 FVSNVGEPSYSLTWQAFRCSRCQMEIAMR-QRGTFQPRPYQCKRSECVARDE----FVPLRSSPY 322
            .|:.|.|....:....:.|.:|..|.... |..||.|. ..|...||.....    ::..|.|.:
Mouse   166 IVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPL-IMCPSQECQTNRSGGRLYLQTRGSKF 229

  Fly   323 TRLSIRQIIRVEESSLNLVHDFET---SMPAEMDVELRHDLVDAVRVGQEVVVTGIL------KL 378
            .:.   |.::::|      |..:.   ::|..:.|.|..:.....:.|..|.||||.      ..
Mouse   230 VKF---QEMKIQE------HSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGF 285

  Fly   379 QELGDDTTTGDTSNQMQPYLKAVSIRDASSIKREFSERDLEAIVMINAEPNSFKLLVQSIAPEVY 443
            |::.....: :|..:....:|.....|..|...|.|..:|:.|    ||.:.::.|..|||||:|
Mouse   286 QQMAQGLLS-ETYLEAHWIVKMTKSDDDVSGAGELSSEELKQI----AEEDFYEKLAASIAPEIY 345

  Fly   444 GHELPKAACLLSLLGGKGAETEA------INVLLVGDPGIGKTKILQSCAQIAERGAHVSGKRGA 502
            |||..|.|.||.|:||.....:.      |::.|:||||:.|:::|....::|.|..:.:| ||:
Mouse   346 GHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTG-RGS 409

  Fly   503 QSAQQLGVTFAGRNKRV-----LQAGSLMMASGGGHCTLDDVDKLA-SKQAVLLQCLQSEEVNLP 561
            ..   :|:|.|.....|     |:.|:|::|. .|.|.:|:.||:| :.:..:.:.::.:.:::.
Mouse   410 SG---VGLTAAVLRDSVSGELTLEGGALVLAD-QGVCCIDEFDKMAEADRTAIHEVMEQQTISIA 470

  Fly   562 LAGAFASFPAQPSVIACANPQRGQYDEGRYLLQNINISPSLLREFHLVYILLDKPS-ERDMSLTA 625
            .||...:..|:.|::|.|||..|:|:..|.|.||:.:..:||..|.|::::.|:|. :.|:.|..
Mouse   471 KAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQ 535

  Fly   626 HVRALHAGARKRARIAARYALKPKMSDSMCEVSLNVPAAGKDDDTIKTEDDNDSIMQQDYDLDKR 690
            |:..:|..:|:                         |.|                  |...||.:
Mouse   536 HITYVHQHSRQ-------------------------PPA------------------QFEPLDMK 557

  Fly   691 LEVLPEEGDLDLLPPILIKKFLSYARQELNPVLNEDASNAVLRYFLELKGSCNLDEDVSSQIGAG 755
                            |::::::.. .|..|.:.|..::.:...::|::......:| ::...|.
Mouse   558 ----------------LMRRYIAMC-HERQPTVPESLADYITAAYVEMRREARASKD-ATYTSAR 604

  Fly   756 QLLAIIHLSQARARLDLSHVVSPQHVRDVIALLTESITQTSLKEGSSRQGTRGGGGAGGGAGKSA 820
            .||||:.||.|.|||.:..:|..:.|.:.|.|:  .:::.||.            |..|...::.
Mouse   605 TLLAILRLSTALARLRMVDIVEKEDVNEAIRLM--EMSKDSLL------------GEKGQTARTQ 655

  Fly   821 QLRNFLELTKRRSAALGRRIFEFDELKEIGTRAGILTGFSQLVEMANLGGYLLMKGANMYEV 882
            :..:.:..|.|...:.||.: .|.|.::    ..|..||:.....|.|..|   :..|:::|
Mouse   656 RPADVIFATIRELVSRGRSV-HFSEAEQ----RCISRGFTPAQFQAALDEY---EELNVWQV 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
recNP_001262615.1 RNR_PFL <117..200 CDD:299130
MCM 243..792 CDD:214631 138/575 (24%)
P-loop_NTPase 468..606 CDD:304359 42/143 (29%)
Mcm7NP_032594.1 MCM_N 12..165 CDD:291233 13/63 (21%)
MCM 145..641 CDD:214631 138/578 (24%)
P-loop_NTPase 376..515 CDD:304359 42/143 (29%)
Arginine finger 513..516 0/2 (0%)
Interaction with RAD17. /evidence=ECO:0000250 521..564 13/101 (13%)
Interaction with ATRIP. /evidence=ECO:0000250 577..719 35/156 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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