DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rec and Mcm6

DIOPT Version :9

Sequence 1:NP_001262615.1 Gene:rec / 49241 FlyBaseID:FBgn0003227 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_032593.1 Gene:Mcm6 / 17219 MGIID:1298227 Length:821 Species:Mus musculus


Alignment Length:769 Identity:176/769 - (22%)
Similarity:308/769 - (40%) Gaps:170/769 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 IKSDAQLKEVWPSLSEDIREHPLRTLGTLSLAMHTVVVNHQLDCNDSTTAMVSTPEQYVLPTPRV 230
            :.|.|.|::....||..|:|...|....|..|:.|.|.:.:                   ..|..
Mouse    62 VVSFADLEQFNQQLSTTIQEEFYRVYPYLCRALKTFVKDRK-------------------EIPFA 107

  Fly   231 RKIYARPDDFVPVESIEGISHSRVDTLFSIRGFVSNVGEPSYSLTWQAFRCSRCQMEIAMRQRGT 295
            :..|....|......|..::.||:..|..|.|.|.........|....|.|..||..|...::..
Mouse   108 KDFYVAFQDLPTRHKIRELTSSRIGLLTRISGQVVRTHPVHPELVSGTFLCLDCQTVIKDVEQQF 172

  Fly   296 FQPRPYQCKRSECVARDEFVPLRSSPYTRLSIRQIIRVEESSLNLVHDFETSMPAEMDVELRHDL 360
            ...:|..|:...|..|..|  |..:..:|....|.:|::|:...|...   |:|..::|.||.:.
Mouse   173 KYTQPNICRNPVCANRKRF--LLDTNKSRFVDFQKVRIQETQAELPRG---SIPRSLEVILRAEA 232

  Fly   361 VDAVRVGQE-------VVVTGILKLQELGDDTTTGDTSNQMQPY-------LKAVSIRD------ 405
            |::.:.|..       :||..:.||...|....|....:....|       |:|:.:||      
Mouse   233 VESAQAGDRCDFTGALIVVPDVSKLSTPGARAETNSRVSGADGYETEGIRGLRALGVRDLSYRLV 297

  Fly   406 ------------------------ASSIKREFSERDLEAIVMINAEPNSFKLLVQSIAPEVYGHE 446
                                    |.|||.:.:.::.|.:..::.:.|.:..|..|:.|.::|::
Mouse   298 FLACHVAPTNPRFGGKELRDEEQTAESIKNQMTVKEWEKVFEMSQDKNLYHNLCTSLFPTIHGND 362

  Fly   447 LPKAACLLSLLG------GKGAETEA-INVLLVGDPGIGKTKILQSCAQIAERGAHVSGKRGAQS 504
            ..|...||.|.|      |:|..... |||.:||||...|::.|:...:.:.|..:.|||  |.|
Mouse   363 EVKRGVLLMLFGGVPKTTGEGTSLRGDINVCIVGDPSTAKSQFLKHVDEFSPRAVYTSGK--ASS 425

  Fly   505 AQQLGVTFA-----GRNKRVLQAGSLMMASGGGHCTLDDVDKLASK-QAVLLQCLQSEEVNLPLA 563
            |  .|:|.|     ..::.|::||:||:|. .|.|.:|:.||:..: |..:.:.::.:.:::..|
Mouse   426 A--AGLTAAVVRDEESHEFVIEAGALMLAD-NGVCCIDEFDKMDMRDQVAIHEAMEQQTISITKA 487

  Fly   564 GAFASFPAQPSVIACANPQRGQYDEGRYLLQNINISPSLLREFHLVYILLDKPSE-RDMSLTAHV 627
            |..|:..|:.|::|.|||..|.||..:.|.||||:|..::..|.|.:||:|:.:| .|.::...:
Mouse   488 GVKATLNARTSILAAANPVSGHYDRSKSLKQNINLSAPIMSRFDLFFILVDECNEVTDYAIARRI 552

  Fly   628 RALHAGARKRARIAARYALKPKMSDSMCEVSLNVPAAGKDDDTIKTEDDNDSIMQQDYDLDKRLE 692
            ..||:                                       :.|:..|.:    |.||.   
Mouse   553 VDLHS---------------------------------------RIEESIDRV----YSLDD--- 571

  Fly   693 VLPEEGDLDLLPPILIKKFLSYARQELNPVLNEDASNAVLRYFLELKGSCNLDEDVSS-QIGAGQ 756
                           |:::|.:||| ..|.:::::.:.::..:..|:.........|| :|...|
Mouse   572 ---------------IRRYLLFARQ-FKPKISKESEDFIVEQYKRLRQRDGSGVTKSSWRITVRQ 620

  Fly   757 LLAIIHLSQARARLDLSHVVSPQHVRDVIALLTESITQTSL-------KEGSSRQGTRGGGGAGG 814
            |.::|.||::.||:.....|.|:||::...||.:||.:...       :|....:...|.||..|
Mouse   621 LESMIRLSESMARMHCCDEVQPKHVKEAFRLLNKSIIRVETPDVNLDQEEEIQMETDEGQGGVNG 685

  Fly   815 GAGKSAQLRNFLELTKRRSAALGRRIFEFDELKEIGTRAGILTGFSQLVEMANL 868
            .|...|.:..|...::             |..:|..::..:..||::...::||
Mouse   686 HADSPAPVNRFNGSSE-------------DASQETVSKPSLRLGFAEYCRISNL 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
recNP_001262615.1 RNR_PFL <117..200 CDD:299130 10/33 (30%)
MCM 243..792 CDD:214631 145/607 (24%)
P-loop_NTPase 468..606 CDD:304359 48/143 (34%)
Mcm6NP_032593.1 MCM_N 29..139 CDD:291233 20/95 (21%)
MCM 119..657 CDD:214631 146/609 (24%)
P-loop_NTPase <447..534 CDD:304359 30/87 (34%)
Arginine finger 528..531 0/2 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 676..708 9/44 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 1 1.000 - - FOG0001226
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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