DRSC/TRiP Functional Genomics Resources

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Protein Alignment rec and Mcm3

DIOPT Version :10

Sequence 1:NP_732072.1 Gene:rec / 49241 FlyBaseID:FBgn0003227 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_032589.1 Gene:Mcm3 / 17215 MGIID:101845 Length:812 Species:Mus musculus


Alignment Length:715 Identity:164/715 - (22%)
Similarity:300/715 - (41%) Gaps:142/715 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 DRGFFPLCAAGIKSDAQLKEVWPSLSEDIREHPLRTLGTLSLAMHTVVVNHQLDCNDSTTAMVST 219
            |:|.:......:.||.|.:.: .|:::..|::..|....|:.|...:|. .|....|...::.:|
Mouse    28 DQGIYQNKVRELISDNQYRLI-VSVNDLRRKNEKRANRLLNNAFEELVA-FQRALKDFVASIDAT 90

  Fly   220 PEQYVLPTPRVRKIYAR--PDDFVPVESIEGISHSRVDTLFS--------IRGFVSNVGEPSYSL 274
                          ||:  .:.::.:|...|..|....||.|        :.|.|:         
Mouse    91 --------------YAKQYEEFYIGLEGSFGSKHVSPRTLTSCFLSCVVCVEGIVT--------- 132

  Fly   275 TWQAFRCSRCQMEIAMRQRGTFQPRPYQCKRS--ECVARDEFVPLRSSPYTRL-----SIRQIIR 332
                 :||..:.::.               ||  .|.|..:.:..|.|..|.|     |.....:
Mouse   133 -----KCSLVRPKVV---------------RSVHYCPATKKTIERRYSDLTTLVAFPSSSVYPTK 177

  Fly   333 VEESS-------LNLVHDFET-------------SMPAEMDVELRHDLVDAVRVGQEVVVTGILK 377
            .||::       |::..|.:|             .:|..:||.|..||||.|:.|..:.|.|..:
Mouse   178 DEENNPLETEYGLSVYKDHQTITIQEMPEKAPAGQLPRSVDVILDDDLVDKVKPGDRIQVVGTYR 242

  Fly   378 LQELGDDTTTGD----TSNQMQPYLKAVSIRDAS-SIKREFSERDLEAIVMIN--AEPNSFKLLV 435
                   ...|.    ||...:..|.|.:::..| .|:..||..|:..|...:  ...:.|:.|.
Mouse   243 -------CLPGKKGCYTSGTFRTVLIACNVKQMSKDIQPAFSADDIAKIKKFSKTRSKDVFEQLA 300

  Fly   436 QSIAPEVYGHELPKAACLLSLLGGKGAETE-------AINVLLVGDPGIGKTKILQSCAQIAERG 493
            :|:||.::||:..|.|.|..||||...|.|       .||:||:|||.:.|:::|:.....|.|.
Mouse   301 RSLAPSIHGHDYVKKAILCLLLGGVERELENGSHIRGDINILLIGDPSVAKSQLLRYVLCTAPRA 365

  Fly   494 AHVSGKRGAQSAQQLGVTFA-----GRNKRVLQAGSLMMASGGGHCTLDDVDKLAS-KQAVLLQC 552
            ...:| ||:..   :|:|.|     ...:|.|:||::::|..|..| :|:.||::. .:..:.:.
Mouse   366 IPTTG-RGSSG---VGLTAAVTTDQETGERRLEAGAMVLADRGVVC-IDEFDKMSDMDRTAIHEV 425

  Fly   553 LQSEEVNLPLAGAFASFPAQPSVIACANPQRGQYDEGRYLLQNINISPSLLREFHLVYILLDK-P 616
            ::...|.:..||..|...|:.||:|.|||..|:||:.:..::||.:..|||..|.|::|:||: .
Mouse   426 MEQGRVTIAKAGIHARLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFIMLDQMD 490

  Fly   617 SERDMSLTAHVRALHAGARKRARIAARYALKPKMSDSMCEVSLNVPAAGKDDDTIKTEDDNDSIM 681
            .|:|..::.||..:|           :|....:.......:..:|.....||.....:|..|:.:
Mouse   491 PEQDREISDHVLRMH-----------QYRAPGEQDGDALPLGSSVDILATDDPDFTQDDQQDTRI 544

  Fly   682 QQDYD-----LDKRLEVLPEEGDLDLLPPILIKKFLSYARQELNPVLNEDASNAVLRYFLELKGS 741
            .:.:|     ..|:.|        .::....:||::..|: .:.|.|.::::..:...:..|:..
Mouse   545 YEKHDSLLHGTKKKKE--------KMVSAAFMKKYIHVAK-IIKPTLTQESAAYIAEEYSRLRSQ 600

  Fly   742 CNLDEDV--SSQIGAGQLLAIIHLSQARARLDLSHVVSPQHVRDVIALLTESITQTSLKEGSSRQ 804
            .::..|.  :|.:.|..|..:|.|:.|.|:..:|..|..|...:.:.|:..:..:..|::...|:
Mouse   601 DSMSSDTARTSPVTARTLETLIRLATAHAKARMSKTVDLQDAEEAVELVQYAYFKKVLEKEKKRK 665

  Fly   805  804
            Mouse   666  665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
recNP_732072.1 Mcm2 177..799 CDD:440854 158/686 (23%)
MCM8 433..791 CDD:350665 98/378 (26%)
MCM8_WHD 819..883 CDD:439328
Mcm3NP_032589.1 MCM_N 16..104 CDD:464206 16/91 (18%)
MCM 109..654 CDD:214631 144/605 (24%)
Arginine finger 477..480 0/2 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 664..744 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.

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