DRSC/TRiP Functional Genomics Resources

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Protein Alignment rec and Mcm6

DIOPT Version :10

Sequence 1:NP_732072.1 Gene:rec / 49241 FlyBaseID:FBgn0003227 Length:885 Species:Drosophila melanogaster
Sequence 2:XP_319406.4 Gene:Mcm6 / 1279642 VectorBaseID:AGAMI1_000689 Length:814 Species:Anopheles gambiae


Alignment Length:868 Identity:189/868 - (21%)
Similarity:323/868 - (37%) Gaps:285/868 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 EDGLQVQSIAVDNPRAYSGWRLYFLREKYEEG------------------------------NEL 130
            |.|::.|.:.:|           ||.|..|:|                              ..|
Mosquito    16 EVGVRCQKLFLD-----------FLEEFKEDGEIKYLKTVENLVNPDRSTLEVSFEDVENYNQTL 69

  Fly   131 ATRIMAVEAYYQRNPHTFDFVMIRDRGFFPLCAAGIKSDAQLKEVWPSLSEDIREHPLRTLGTLS 195
            ||.|  :|.||:..|:              ||              .|:|..:|:.         
Mosquito    70 ATAI--IEEYYRIFPY--------------LC--------------QSVSNFVRDR--------- 95

  Fly   196 LAMHTVVVNHQLDCNDSTTAMVSTPEQYVLPTPRVRKIYARPDDFVPV---ESIEGISHSRVDTL 257
                              |::..:.|.||              .||.|   ..:..:|.|::.||
Mosquito    96 ------------------TSLKKSKECYV--------------SFVDVPTRHKVRELSTSKIGTL 128

  Fly   258 FSIRGFVSNVGEPSYSLTWQAFRCSRCQMEIA-MRQRGTFQPRPYQCKRSECVARDEFVPLRSSP 321
            ..|.|.|.........|....|.|..||.||. :.|:..| ..|..|:...|..|..|:      
Mosquito   129 IRISGQVVRTHPVHPELVLGTFVCLDCQTEIRDVEQQFKF-TNPTICRNPVCANRRRFM------ 186

  Fly   322 YTRLSIR-------QIIRVEESSLNLVHDFETSMPAEMDVELRHDLVDAVRVGQEVVVTGIL--- 376
               |.:.       |.:|::|:...|...   .:|..::|.||.::|:.|:.|.....||.|   
Mosquito   187 ---LEVDKSLFIDFQKVRIQETQAELPRG---CIPRSVEVILRAEMVETVQAGDRYDFTGTLIVI 245

  Fly   377 ----KLQ------ELGDDTTTGDTSNQMQPYLKAVSIRD--------ASSI-------------- 409
                .||      |:|.....||.:.:....|||:.:||        |.|:              
Mosquito   246 PDVGALQLPGAKAEIGSRHKQGDNAAEGVRGLKALGMRDLNYKMAFLACSVQVTSSRFGGTDMPM 310

  Fly   410 --------KREFSERDLEAIVMINAEPNSFKLLVQSIAPEVYGHELPKAACLLSLLGGKGAETEA 466
                    |.:.:..:...:..::.:|..::.|:.|:.|.:||::..|...||.|.||....|:.
Mosquito   311 SEVTSQIMKDQMTPAEWNKVYEMSRDPRLYQNLINSLFPSIYGNDEVKRGILLMLFGGVAKTTQE 375

  Fly   467 -------INVLLVGDPGIGKTKILQSCAQIAERGAHVSGKRGAQSAQQLGVTFA-GRNKR----V 519
                   |||.:||||...|::.|:..:..:.|..:.|||  |.||  .|:|.| .|::.    |
Mosquito   376 KTTLRGDINVCIVGDPSTAKSQFLKQVSDFSPRAVYTSGK--ASSA--AGLTAAVVRDEESFDFV 436

  Fly   520 LQAGSLMMASGGGHCTLDDVDKL-ASKQAVLLQCLQSEEVNLPLAGAFASFPAQPSVIACANPQR 583
            ::||:||:|. .|.|.:|:.||: ...|..:.:.::.:.:::..||..|:..|:.|::|.|||..
Mosquito   437 IEAGALMLAD-NGICCIDEFDKMDPHDQVAIHEAMEQQTISIAKAGVRATLNARTSILAAANPIG 500

  Fly   584 GQYDEGRYLLQNINISPSLLREFHLVYILLDKPSERDMSLTAHVRALHAGARKRARIAARYALKP 648
            |:||..:.|.|||.::..::..|.|.:||:|:.:|                      ...||:..
Mosquito   501 GRYDRSKSLQQNIQLTAPIMSRFDLFFILVDECNE----------------------VVDYAIAR 543

  Fly   649 KMSD--SMCEVSLNVPAAGKDDDTIKTEDDNDSIMQQDYDLDKRLEVLPEEGDLDLLPPILIKKF 711
            |:.|  |..|.||         |.:.:.:|                               :.::
Mosquito   544 KIVDLHSHIEHSL---------DQVYSRED-------------------------------VLRY 568

  Fly   712 LSYARQELNPVLNEDASNAVLRYFLELKGSCNLDEDVSS------QIGAGQLLAIIHLSQARARL 770
            :.:||| ..||:..:|...::..:..|:     ..|..:      :|...||.::|.||:|.|::
Mosquito   569 IMFARQ-FKPVIQPEAMALLVENYGHLR-----QRDTGTTGKSTWRITVRQLESMIRLSEAMAKM 627

  Fly   771 DLSHVVSPQHVRDVIALLTESITQTSL-------KEGSSRQGTRGGGGAGGGAGKSAQLRNFLEL 828
            :.|..|:.:||::...||.:||.:...       :||...:...   ..|....:.....|..|.
Mosquito   628 ECSEEVTERHVKEAYRLLNKSIIRVEQPDIHLDEEEGEENENVM---DIGEETPEDTPRTNETEE 689

  Fly   829 TKRRSAALGRR--IFEFDELKEI 849
            ..:.:.|:.::  ...|:|.|.:
Mosquito   690 NDQDTPAVAKKKLTLSFEEYKNL 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
recNP_732072.1 Mcm2 177..799 CDD:440854 161/703 (23%)
MCM8 433..791 CDD:350665 98/378 (26%)
MCM8_WHD 819..883 CDD:439328 6/33 (18%)
Mcm6XP_319406.4 None

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