DRSC/TRiP Functional Genomics Resources

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Protein Alignment rec and dpa

DIOPT Version :10

Sequence 1:NP_732072.1 Gene:rec / 49241 FlyBaseID:FBgn0003227 Length:885 Species:Drosophila melanogaster
Sequence 2:XP_315054.3 Gene:dpa / 1275768 VectorBaseID:AGAMI1_003160 Length:876 Species:Anopheles gambiae


Alignment Length:369 Identity:64/369 - (17%)
Similarity:129/369 - (34%) Gaps:90/369 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 FAEQYVEDSYQNAGALALTGQNMNISNVHNGVHISTPTENLA--ENNANNGLDAIADLVKPY-QN 165
            |....:.:.|:...|.||...|         .||.:...|:|  |::|...:..|..:...| .|
Mosquito   131 FETMQLLEPYRQKYAYALVALN---------EHIISLCRNIAGQEHDAAEYISRIYYIYSMYLVN 186

  Fly   166 VQLESSSKQKVQRPKIAHKNSCAHGYKYAVA--------YQILKDNVGYEIPVDTVKLCRENHID 222
            ....:|:...:|   ||......|.:...|.        ::::..|:..::.:....:.|::..|
Mosquito   187 TGQRTSAINFLQ---IAMDLVRGHVWTAEVGMPAGSLTLHELVAQNLARQLLIQGKSIVRQHPED 248

  Fly   223 TKVLNMVVRRLEELGAIERPLNLHVRFTPEFK-----FKEIDEFQSTHIEIEKLDQE-------- 274
              .:.|..|....:..|.|..|:.: |...|.     ..||..|.|....:|::..:        
Mosquito   249 --AVAMARRATVLIAEIGRDKNMEI-FCDTFLERAYFLMEIGNFNSAQQCLEQIKTQILACTEYR 310

  Fly   275 -----------EKELDEMLEIAQKQLAEVKR--NPYAFFTSADINLRGNEVLI------AKAHDV 320
                       :.:..|:.|..:|..:..||  .....:|..|:..   |:|:      ||...:
Mosquito   311 FVKLNIKYYLIQGQCSEIFEHVEKATSCYKRALRLSRLYTHRDLEA---EILLHLGKIFAKDTQM 372

  Fly   321 T---VDCMTGMNRVVTNMDAVKIDKM-NYLNNRFPKEALTKI----------------DNKKYKA 365
            |   ..|.....|:..:.:.:...|| |||..:...:.:|.:                :.:::|.
Mosquito   373 TSIAKKCYEHAKRIYVDFNDLHSRKMANYLQAKLMADEITPLYMAMLKSSTTRYCAFFNLRQWKN 437

  Fly   366 AAKIIDKNIGQDKVQLKQKSKDEAVMKILRQFSGTNEASDPSDE 409
            ..:...|.:|.:.:    |.:.:::..:|.:     |..||..:
Mosquito   438 RCRPFWKRLGDEII----KQETDSIYCLLDE-----EKEDPGHD 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
recNP_732072.1 Mcm2 177..799 CDD:440854 48/293 (16%)
MCM8 433..791 CDD:350665
MCM8_WHD 819..883 CDD:439328
dpaXP_315054.3 None
Blue background indicates that the domain is not in the aligned region.

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