DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NTSR1 and ntsr1

DIOPT Version :10

Sequence 1:NP_002522.2 Gene:NTSR1 / 4923 HGNCID:8039 Length:418 Species:Homo sapiens
Sequence 2:XP_073794861.1 Gene:ntsr1 / 569344 ZFINID:ZDB-GENE-090313-372 Length:482 Species:Danio rerio


Alignment Length:206 Identity:128/206 - (62%)
Similarity:161/206 - (78%) Gaps:11/206 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    38 ASGNASERVL-----AAPSSELDVNTDIYSKVLVTAVYLALFVVGTVGNTVTAFTLARKKSLQSL 97
            :|.|.|:..|     :....:||||||||||||||.:|:.||::|.:||::|.:||..|||||:|
Zfish    23 SSANRSQPFLDNETESLSEEDLDVNTDIYSKVLVTVIYVVLFLIGCLGNSITLYTLLTKKSLQNL 87

Human    98 QSTVHYHLGSLALSDLLTLLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASL 162
            ||||||||.|||:||||.|:|.||:|||||||||||||||:|.|:|||||||.|:||||.|:|||
Zfish    88 QSTVHYHLASLAISDLLILVLCMPIELYNFIWVHHPWAFGEAVCKGYYFLRDGCSYATAFNIASL 152

Human   163 SVERYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAVPMLFTMGEQNRSADGQHAGGLVCTPT 227
            ||||::|||||||||::||||||||.|||:|:||..||.|||||||:|..:.:      .:||..
Zfish   153 SVERFMAICHPFKAKSIMSRSRTKKLISAMWIASFFLATPMLFTMGQQLMNDE------YICTTI 211

Human   228 IHTATVKVVIQ 238
            :.:.|.|.|:|
Zfish   212 VSSITAKTVLQ 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NTSR1NP_002522.2 7tmA_NTSR1 64..375 CDD:320477 114/175 (65%)
TM helix 1 64..91 CDD:320477 13/26 (50%)
TM helix 2 101..127 CDD:320477 19/25 (76%)
TM helix 3 141..171 CDD:320477 22/29 (76%)
TM helix 4 183..205 CDD:320477 15/21 (71%)
TM helix 5 233..262 CDD:320477 3/6 (50%)
TM helix 6 296..326 CDD:320477
Neurotensin binding. /evidence=ECO:0000250 321..344
TM helix 7 343..368 CDD:320477
ntsr1XP_073794861.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.