DRSC/TRiP Functional Genomics Resources

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Protein Alignment mod(mdg4) and Aoc1

DIOPT Version :9

Sequence 1:NP_788698.1 Gene:mod(mdg4) / 49228 FlyBaseID:FBgn0002781 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001155093.1 Gene:Aoc1 / 76507 MGIID:1923757 Length:756 Species:Mus musculus


Alignment Length:105 Identity:26/105 - (24%)
Similarity:39/105 - (37%) Gaps:41/105 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 VFLNNVSHSALKDLIQFMYCGEVNVKQDALPAFISTAESLQIKGLTDNDPAP----QPPQESSPP 132
            ::.|...:::.::|.|....|||              |::.::.:...||.|    |||..||..
Mouse   241 LWYNGKFYNSPEELAQKYAVGEV--------------EAVVLEEVVLEDPLPGATEQPPLFSSYK 291

  Fly   133 P----------AAPHVQQQQIPAQRVQRQQPRASARYKIE 162
            |          |.|||.|...|             |||:|
Mouse   292 PRGEFHTPVTVAGPHVVQPSGP-------------RYKLE 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mod(mdg4)NP_788698.1 BTB 22..118 CDD:279045 7/45 (16%)
BTB 33..118 CDD:197585 7/45 (16%)
FLYWCH 452..512 CDD:282369
Aoc1NP_001155093.1 Cu_amine_oxidN2 44..129 CDD:367157
Cu_amine_oxidN3 146..245 CDD:367158 0/3 (0%)
Cu_amine_oxid 305..717 CDD:376479 9/27 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.788662 Normalized mean entropy S7188
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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