DRSC/TRiP Functional Genomics Resources

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Protein Alignment mod(mdg4) and CG34376

DIOPT Version :9

Sequence 1:NP_788698.1 Gene:mod(mdg4) / 49228 FlyBaseID:FBgn0002781 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_732741.1 Gene:CG34376 / 42638 FlyBaseID:FBgn0085405 Length:681 Species:Drosophila melanogaster


Alignment Length:566 Identity:128/566 - (22%)
Similarity:202/566 - (35%) Gaps:155/566 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DEQFSLCWNNFNTNLSAGFHESLCRGDLVDVSLAAEGQIVKAHRLVLSVCSPFFRKMFTQMPSNT 68
            |::|.|||.||..|:::||.....|||||||:||.:|:::.||::||::|||:|:::||..|.. 
  Fly     2 DDEFKLCWKNFQDNIASGFQNLYDRGDLVDVTLACDGKLLHAHKIVLAICSPYFQEIFTTNPCK- 65

  Fly    69 HAIVFLNNVSHSALKDLIQFMYCGEVNVKQDALPAFISTAESLQIKGLTDNDPAPQPPQESSPPP 133
            |.|:.|.:||.:.:.:|::|||.|.||||...|.:|:...:.||||||..|       ..|||..
  Fly    66 HPIIILKDVSFNIMMELLEFMYQGVVNVKHTELQSFMKIGQLLQIKGLATN-------SNSSPGS 123

  Fly   134 AAPHVQQQQIPAQRVQRQQPRASARYKIETVDDGLGDEKQSTTQIVIQTTAAPQATIVQQQQPQQ 198
            :.......|.||                         |:.|.|                      
  Fly   124 SVSEKSSSQPPA-------------------------EESSNT---------------------- 141

  Fly   199 AAQQIQSQQLQTGTTTTATLVSTNKRSAQRSSLTPASSSAGVKRSKTSTSANVMDPLDSTTETGA 263
                         .:|.....|||..:..:|. |..:.|.|...|:|::........:..:.. .
  Fly   142 -------------NSTNHHNSSTNSNNNSKSE-TDHNESKGQSNSRTTSPGGASRASNDASHL-Y 191

  Fly   264 TTTAQLVPQQITVQTSVVSAAEAKLHQQSPQQVRQEEAEYIDLPMELPTKSEPDYSE-------- 320
            |:..:.:|...         ....|...|.:|:|               :|..|:..        
  Fly   192 TSNKRPMPSDF---------GSDSLSIYSGKQLR---------------RSLKDHGSGGSEGGGG 232

  Fly   321 DHGDAAGDAEGTYVEDD---------TYGDMRYDDSYFTENEDA---GNQTAANTSGGGVTATTS 373
            ||.|.|...:.:...::         |.|:.|||........|.   |..:|...:.|.|.:.||
  Fly   233 DHADTAAGLDNSMNSEEFFLPPIPQITMGEQRYDLGGLKRESDGHHHGPLSAGGGNSGSVGSLTS 297

  Fly   374 KAVVKQQSQNYSESSFVDT------------SGDQGNTEAQAATS-------ASATKIPPRKRGR 419
            .|......:|....:|:|:            ||...|:......:       .|..:.|      
  Fly   298 SASPSAPIRNPFAPNFMDSFNYYKGGNSSGPSGSSNNSVGPGGVNNNGSVGLGSGAEYP------ 356

  Fly   420 PKTKVEDQTPKPKLLEKLQAATLNEEAS-EPAVYASTTKGGVKLIFNGHLFKFSFRKA---DYSV 480
                  ::...|....|..|..::..:| ...|..|||    .|:....:|..:...|   ....
  Fly   357 ------NELYMPNDYSKSFANHMDIPSSGSNMVMLSTT----SLLHGNCVFNRNNTVATQQGMKT 411

  Fly   481 FQCCYREHGEECKVRVVCDQKRVFPYEGEHVH--FMQASDKSCLPS 524
            :..|.......|:.|.:....|:....|.|.|  .|:....|..||
  Fly   412 YWLCKSYRISMCRARCITHLGRIISATGVHNHTPHMRGGQGSSAPS 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mod(mdg4)NP_788698.1 BTB 22..118 CDD:279045 44/95 (46%)
BTB 33..118 CDD:197585 38/84 (45%)
FLYWCH 452..512 CDD:282369 12/62 (19%)
CG34376NP_732741.1 BTB 20..113 CDD:279045 42/93 (45%)
BTB 31..115 CDD:197585 38/84 (45%)
FLYWCH 390..443 CDD:282369 9/52 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 1 0.900 - - E1_2DQDA
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.000

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