DRSC/TRiP Functional Genomics Resources

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Protein Alignment mod(mdg4) and CG6118

DIOPT Version :9

Sequence 1:NP_788698.1 Gene:mod(mdg4) / 49228 FlyBaseID:FBgn0002781 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001097806.1 Gene:CG6118 / 41884 FlyBaseID:FBgn0038339 Length:967 Species:Drosophila melanogaster


Alignment Length:593 Identity:124/593 - (20%)
Similarity:200/593 - (33%) Gaps:199/593 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EQFSLCWNNFNTNLSAGFHESLCRGDLVDVSLAAEGQIVKAHRLVLSVCSPFFRKMFTQMPSNTH 69
            :|:.|.||||:.|:..|||.......:|||::||.|:|.|||:||||||||:|:::|.:.|| :|
  Fly   391 DQYLLSWNNFHGNMCRGFHSLQKDEKMVDVTIAAGGKIFKAHKLVLSVCSPYFQQIFLENPS-SH 454

  Fly    70 AIVFLNNVSHSALKDLIQFMYCGEVNVKQDALPAFISTAESLQIKGL-----TDNDP-------- 121
            .|:.:.:|..|.:..|:.|||.|:||||.:.||.|:..||:::||||     .|:|.        
  Fly   455 PILLMADVEASHMAGLLDFMYSGQVNVKYEDLPVFLKVAEAMKIKGLHTEKNLDSDASDISSPHE 519

  Fly   122 ---------------------------APQPPQESSPPPA------------------------A 135
                                       ||. .|:|||.|:                        .
  Fly   520 SDGTECRYERGTHSVNITSGHAAGYGGAPS-SQQSSPSPSLNGPNRCPTPLSSGGSGNPNYAGFR 583

  Fly   136 PHVQQQQIPAQRVQ--------------------------------------------------R 150
            .|::.:...|:...                                                  |
  Fly   584 EHIKSKATLAETFMKNLNRNNNNNNSSNNYNHLGGSNGSLNLTEADSNSFAILQANSKKMLDSAR 648

  Fly   151 QQPRASARYKI-------------------------ETVDDGLGDEKQSTTQIVIQ---TTAAPQ 187
            :|.:..|:.||                         |..||.|.:........:::   ||..||
  Fly   649 KQHKYLAKRKILMHYNTELGGEKRLKEMERDRYPSAEQHDDALNNNHSHAQDNIMEPIITTIVPQ 713

  Fly   188 ATIVQQQQPQQAAQQIQSQQLQTGTTTTATLVSTNKRSAQRSSLTPASSSAG--------VKRSK 244
            .............:.::|..|...:.......|.|    ..||.:|.|:...        |:...
  Fly   714 TPPPSTHNNNFKIRLVESHHLTNNSNNNQNQSSNN----NNSSSSPQSNDCNNDEEALNLVQIPN 774

  Fly   245 TSTSANVMDPLDSTTETGATTT--AQLVPQQITVQTSVVSAAEAKLHQQSPQQVRQEEAEYID-- 305
            .:.|.|     ...|.|.||.|  .||:.:::..:.|....................:.:|.|  
  Fly   775 ANGSRN-----REATPTCATPTPDIQLIKREVKTELSPAENLSNNNGHDDEMAGAGFDRKYDDNN 834

  Fly   306 ----LPMELPTKSEPDYSEDHGD-------AAG-----DAEGTYVEDDTYGDMRYDDSYFTENED 354
                |.||  |.|..:.|:..||       |.|     .|....:|.| :.|..:.|....|.:.
  Fly   835 NNSGLDME--TDSNNNNSKPGGDNNNGLALALGKHKLLSAINRNIEQD-HPDHEHQDQQDREADH 896

  Fly   355 AGNQTAANTSGGGVTATTSKAVVKQQSQNYSESSFVDTSGDQGNTEAQAATSASATKIPPRKRGR 419
            .||...::.:               .:.|:|:...:.|..:....|......:...|:...:|.|
  Fly   897 GGNNCNSDDN---------------NNNNHSQHLDLSTIKNIATAEILCGLKSKVLKLEEEQRER 946

  Fly   420 PKTKVEDQ 427
            .:.:..::
  Fly   947 ERERERER 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mod(mdg4)NP_788698.1 BTB 22..118 CDD:279045 46/100 (46%)
BTB 33..118 CDD:197585 43/89 (48%)
FLYWCH 452..512 CDD:282369
CG6118NP_001097806.1 Myb_DNA-bind_4 20..97 CDD:290549
BTB 408..508 CDD:279045 46/100 (46%)
BTB 419..510 CDD:197585 44/91 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I10232
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.100

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