DRSC/TRiP Functional Genomics Resources

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Protein Alignment mod(mdg4) and CG15812

DIOPT Version :9

Sequence 1:NP_788698.1 Gene:mod(mdg4) / 49228 FlyBaseID:FBgn0002781 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_523897.2 Gene:CG15812 / 38379 FlyBaseID:FBgn0035405 Length:518 Species:Drosophila melanogaster


Alignment Length:501 Identity:107/501 - (21%)
Similarity:185/501 - (36%) Gaps:134/501 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DVSLAA-EGQIVKAHRLVLSVCSPFFRKMFTQMPSNTHAIVFLNNVSHSALKDLIQFMYCGEVNV 96
            :|.||: :|..|:||..|||.||...|.:...:|....|.:.|.::....|:.::.|:|.||.::
  Fly    28 EVVLASRDGVRVRAHLFVLSTCSELMRNLLVDVPRGQEATIMLPDIRGDLLECMLSFIYMGETSL 92

  Fly    97 KQDALPAFISTAESLQIKGLTDNDPAPQPPQESSPPPAAPHVQQQQIPAQRVQRQQPRASARYKI 161
            ...:||.|:.....|.||.....:..|     |:.||:. .|:...:..:       .|.:...:
  Fly    93 PSASLPEFLEAINLLGIKSAISFECNP-----SASPPSV-DVENHSLAVE-------SAKSITGL 144

  Fly   162 ETVDDGLGDEKQSTTQIVIQTTAAPQATIV-QQQQPQQAAQQIQ--------------------- 204
            :..:..|.|:::....:|    :.|..|:. .|.||..:::.::                     
  Fly   145 QIAEAELLDDEEEPHPMV----SVPATTLAGSQHQPSHSSRSLEYIDVYEPPKITYSIEHMDGSS 205

  Fly   205 --SQQLQTGTTTTATLVSTNKRSAQRSSLTPASSSAGVKRSKTSTSANVMDPLDSTTETGATTTA 267
              :|.:.|..|.|.|:..:            |||.:.::..:|.||...:|..|..         
  Fly   206 SGNQFILTENTGTFTITQS------------ASSLSKIEADETGTSGAEVDLGDDD--------- 249

  Fly   268 QLVPQQITVQTSVVSAAEAKLHQQSPQQVRQEEAEYIDLPMELPTKSEPDYSEDHGDAAGDAEGT 332
                         |.|..|:..::...|:..||....|..|||...:|.|               
  Fly   250 -------------VDADLAEDSEEHESQMIDEEFAQADPLMELEAGTEMD--------------- 286

  Fly   333 YVEDDTYGDMRYDDSYFTENEDAGNQTAANTSGGGVT----ATTSKAVVK------QQSQNYSE- 386
              :||...|...|:    |.:|...:.     |||.|    ..::|||.:      .:.|.::. 
  Fly   287 --DDDDVHDQLVDE----EIDDKPRKL-----GGGKTRIRRPISAKAVKRLSDCKPTRIQQFAAL 340

  Fly   387 --------SSFVDTSGD----QGNTEAQAAT--SASATKIPPRKRGRPKTKVEDQTPKPKLLEKL 437
                    :..:|.:.|    :|.:..:||.  ..|.|.:..|.|..| ..:.:...:|.|.|..
  Fly   341 KREVKDDINDALDLAADAVIIEGLSLQKAADRFDISKTVLWRRVRTNP-AYMRNNRERPSLQEAY 404

  Fly   438 Q----AATLNEEASEPAVYASTT-KGGVKLIFNGHLFKF-SFRKAD 477
            :    ..:|...:||..:..||. :..|:|...|.|..| |.||.|
  Fly   405 ERLKNGHSLKSISSELQIPMSTLHRHKVRLSAQGRLPNFVSCRKRD 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mod(mdg4)NP_788698.1 BTB 22..118 CDD:279045 27/85 (32%)
BTB 33..118 CDD:197585 27/85 (32%)
FLYWCH 452..512 CDD:282369 11/28 (39%)
CG15812NP_523897.2 BTB 20..113 CDD:279045 27/84 (32%)
BTB 35..118 CDD:197585 24/82 (29%)
HTH_psq 348..392 CDD:283007 10/44 (23%)
HTH_psq 458..501 CDD:283007
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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