DRSC/TRiP Functional Genomics Resources

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Protein Alignment mod(mdg4) and CG8924

DIOPT Version :9

Sequence 1:NP_788698.1 Gene:mod(mdg4) / 49228 FlyBaseID:FBgn0002781 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_573091.1 Gene:CG8924 / 32557 FlyBaseID:FBgn0030710 Length:514 Species:Drosophila melanogaster


Alignment Length:466 Identity:122/466 - (26%)
Similarity:184/466 - (39%) Gaps:116/466 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EQFSLCWNNFNTNLSAGFHESLCRGDLVDVSLAAEGQIVKAHRLVLSVCSPFFRKMFTQMPSNTH 69
            ::|.:.||:...::.|.|.:.|.....|||:||.|||.|..|||||:.||.:|..:..:.|....
  Fly     6 QEFCVRWNSHLGSIGAAFPQLLAGQRFVDVTLACEGQQVHCHRLVLAACSTYFEAILAEHPCKHP 70

  Fly    70 AIVFLNNVSHSALKDLIQFMYCGEVNVKQDALPAFISTAESLQIKGLTDNDPAPQPPQESSPPPA 134
            .|:....:....::.|:.|||.|||||.|..|...:..||.|||:||          ..|..|..
  Fly    71 VIILPREIKLWEIQALVDFMYKGEVNVTQAGLGQLLRCAEQLQIRGL----------YGSEAPIN 125

  Fly   135 APHVQQQQIPAQRVQRQQPRASARYKIETVDDGLGDE--KQSTTQIVIQTTAAP-------QATI 190
            ...:||..:.|.:    .|.|:.....:.||....|:  ..|||...:.|::||       |.|:
  Fly   126 YKKLQQASLEAAK----DPAATTARSFKHVDSAETDDAATNSTTSTTMTTSSAPPLPVNHQQPTV 186

  Fly   191 VQQQQPQQAAQQIQSQQLQTGTTTTATLVSTNKRSAQRSSLTPASSSAGVKRSKTSTSANVMD-- 253
            :::|.|....||.|.||.|.               .||    |..:.:..::...:||.||:.  
  Fly   187 LKRQNPDARQQQQQQQQQQV---------------QQR----PQINGSNAQQPSKATSTNVLGSH 232

  Fly   254 ---PL--DSTTET------------GATTTAQLVPQQITVQTSVVSAAEAKLHQQSPQQVRQEEA 301
               |.  ||..|.            ....:||.|..::.|..|:         ||:..|::.::.
  Fly   233 SNAPTEDDSGDEVPNNWNAYGEQFDDCNISAQAVDNKMNVHLSL---------QQARMQMQLQQQ 288

  Fly   302 EYIDLPMELPTKSEPDYSEDHGDAAGDAEGTYVEDDTYGDMRYDDSYFTENEDAGN--------- 357
            :|:|..:|          :||...|...|.             :||.|......|:         
  Fly   289 QYLDSNVE----------DDHNYVAAHDEN-------------NDSSFATGVPCGSGLSLSLDTD 330

  Fly   358 -QTAANTSGG-------GVTA----TTSKAVVKQQSQNYSESSFVDTSGDQGNTEAQAATSASAT 410
             .|:||||||       |.|:    ..|:|.:.|.::..|:.....|..:..|..........|.
  Fly   331 LDTSANTSGGLSHSSIDGYTSYKRVRRSEASLAQAAKCVSKGETFQTVSNMFNIPVSTIRFYMAR 395

  Fly   411 K--IPPRKRGR 419
            |  :|.|||||
  Fly   396 KGILPKRKRGR 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mod(mdg4)NP_788698.1 BTB 22..118 CDD:279045 39/95 (41%)
BTB 33..118 CDD:197585 36/84 (43%)
FLYWCH 452..512 CDD:282369
CG8924NP_573091.1 BTB 25..117 CDD:279045 36/91 (40%)
BTB 34..117 CDD:197585 34/82 (41%)
MerR 378..407 CDD:278788 9/29 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 50 1.000 Inparanoid score I5472
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.060

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