DRSC/TRiP Functional Genomics Resources

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Protein Alignment mod(mdg4) and mamo

DIOPT Version :9

Sequence 1:NP_788698.1 Gene:mod(mdg4) / 49228 FlyBaseID:FBgn0002781 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_572932.2 Gene:mamo / 32353 FlyBaseID:FBgn0267033 Length:1553 Species:Drosophila melanogaster


Alignment Length:473 Identity:128/473 - (27%)
Similarity:194/473 - (41%) Gaps:112/473 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EQFSLCWNNFNTNLSAGFHESLCRGDLVDVSL-AAEGQIVKAHRLVLSVCSPFFRKMFTQMPSNT 68
            |.:.|.|||:.:||...|.:.|..|.||||:| .:||..::||::|||.||.:|:.:|.:.|.. 
  Fly     4 EHYCLRWNNYQSNLLGVFSQLLQDGSLVDVTLVCSEGTSIRAHKVVLSACSSYFQSLFLEHPEG- 67

  Fly    69 HAIVFLNNVSHSALKDLIQFMYCGEVNVKQDALPAFISTAESLQIKGLTD----NDPAPQPPQES 129
            |.||.|.:|..:.|:.|::|||.|||||:...|.|.:.|||||::|||.:    |....:|.:|.
  Fly    68 HLIVILKDVRFAELQTLVEFMYKGEVNVQYCQLSALLKTAESLKVKGLAEMTNQNTTLREPEREP 132

  Fly   130 SPPPAAPHVQQQQIPAQRVQRQQPRASARYKIETVDDGLGDEKQSTTQIVIQTTAAPQATIVQQQ 194
                               .|.:|:....      ..|...:...:....:..|||.||......
  Fly   133 -------------------DRLRPQGGGG------SGGSAHKAADSPAAALDATAATQAATATAT 172

  Fly   195 QPQQAAQQIQSQQLQTGTTTTAT-LVSTNKRSAQRSSLTPASSSAGVKRSKTSTSANVMDPLDST 258
            ....||         |.|:|:|| ..:|...:|..|:.|.|:::||...:.|:|:|..    .:|
  Fly   173 ATAAAA---------TSTSTSATSAAATAAATAATSASTTATAAAGSSNTTTTTAATT----TAT 224

  Fly   259 TETGATTTAQLVPQQITVQTSVVSAAEA------------------------------------- 286
            ..|.||:||     ..:..:||.|||.|                                     
  Fly   225 CATAATSTA-----ATSSSSSVTSAAAAAAAAASASGVAHSEEATSSSSSTGGQKREASDRSSPT 284

  Fly   287 ------KLHQQSPQQV---RQEEAEYID--LPMELPTKSEPDYSEDHGDAAGDAEGTYV----ED 336
                  ::|......|   |::|....|  |..||..::..|..:|..|...:.|.|.:    ||
  Fly   285 PAKRSSRMHPADKVDVAEDREQEQNQADELLSEELLGRNLKDEEDDDVDELDENEETKLRGRDED 349

  Fly   337 DTYGDMRYD-----DSYFTEN---EDAGNQTAANTSGGGVTATTSKAVVKQQS--QNYSESSFVD 391
            |...|...|     |.|...|   :.|...|||...|....:.:|.|.....|  .|.:.::..:
  Fly   350 DDDEDEEEDTPMPLDLYQRPNVEPKSAAAATAAQQGGSNSLSGSSNACHTNSSSNSNNNNNNNNN 414

  Fly   392 TSGDQGNTEAQAATSASA 409
            :|.:..|..:...||||:
  Fly   415 SSSNNNNNTSSGKTSASS 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mod(mdg4)NP_788698.1 BTB 22..118 CDD:279045 45/96 (47%)
BTB 33..118 CDD:197585 40/85 (47%)
FLYWCH 452..512 CDD:282369
mamoNP_572932.2 BTB 21..118 CDD:279045 45/97 (46%)
BTB 32..118 CDD:197585 40/86 (47%)
C2H2 Zn finger 1082..1105 CDD:275368
C2H2 Zn finger 1116..1137 CDD:275368
C2H2 Zn finger 1149..1169 CDD:275368
zf-C2H2 1469..1491 CDD:278523
C2H2 Zn finger 1471..1491 CDD:275368
zf-H2C2_2 1483..1506 CDD:290200
C2H2 Zn finger 1499..1519 CDD:275368
zf-H2C2_2 1511..1536 CDD:290200
C2H2 Zn finger 1527..1547 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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