DRSC/TRiP Functional Genomics Resources

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Protein Alignment mod(mdg4) and CG32121

DIOPT Version :10

Sequence 1:NP_788698.1 Gene:mod(mdg4) / 49228 FlyBaseID:FBgn0002781 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001097599.1 Gene:CG32121 / 317867 FlyBaseID:FBgn0052121 Length:648 Species:Drosophila melanogaster


Alignment Length:623 Identity:143/623 - (22%)
Similarity:225/623 - (36%) Gaps:173/623 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EQFSLCWNNFNTNLSAGFHESLCRGDLVDVSLAAEGQIVKAHRLVLSVCSPFFRKMFTQMPSNTH 69
            :||.|.|:|..|:|.:.....|.:..|.||:::|||:.::|||:|||.||.||..:|..:.::.|
  Fly    28 QQFCLRWHNHQTSLLSTLPILLDQSHLTDVTISAEGRQLRAHRVVLSACSSFFMDIFRALEASNH 92

  Fly    70 AIVFLNNVSHSALKDLIQFMYCGEVNVKQDALPAFISTAESLQIKGLTD--NDPAP--------- 123
            .::.:...|..|:..|:.|||.|||||.::.:|..::.||:|.||||.|  |:..|         
  Fly    93 PVIIIPGASFGAIVSLLTFMYSGEVNVYEEQIPMLLNLAETLGIKGLADVQNNNLPKTARSGGGS 157

  Fly   124 ------------QPPQESSPPPAAPHVQQQQIPAQRVQRQQPR-ASARYKIETVDDGLGDEKQS- 174
                        :.|...||.| .|.:.....|........|: .||......:.:.||....| 
  Fly   158 YMDTTNEKSSEFERPTTPSPTP-TPTLTPSHTPTPSHSLPLPQLPSAALNTPLLANKLGSVNSSG 221

  Fly   175 --TTQIV------------------IQTTAAPQATIV---QQQQPQQAAQQIQSQQLQTGTTTTA 216
              ||.:.                  ...||..:.|.:   .|||.|.....:|..||:|....:.
  Fly   222 MGTTPLENLFKSLQFYPSLLPQPLNFSQTALNKTTELLAKYQQQCQLYQSGMQEDQLETDCFGSK 286

  Fly   217 TLVSTNK----RSAQRSSL-TPASSS-AGVKRSKTSTSANVMDPLDSTTET--GATTTAQLVPQQ 273
            .|...:.    |..::|.| .|.||| .....||:....:..:|:.:|:..  ...|.|...||.
  Fly   287 RLKGDSPPKELRRLEKSLLKNPKSSSTTNSSSSKSPQECSNPNPIVATSPVTLAPPTMAHFSPQL 351

  Fly   274 ITVQTSVVS----AAEAKLHQQSP------------QQVRQ---------------EEAEYIDLP 307
            ..|:.|..|    ..:.:|:...|            ||..|               |:...:.|.
  Fly   352 PVVKCSSASYPSALGQGQLYSSKPPLYSAAVTPTAAQQAAQMHHHPQPGPSPYISAEDHAKLQLH 416

  Fly   308 ME-------------------LPTKSEPD---YSEDHGDAAGDA--------------------- 329
            :|                   :..||||:   .|.|...:...|                     
  Fly   417 IEQYQREAAAAAAAAAGGMALVSAKSEPNLLSLSADRDKSLATAPIKPPSNSKLYATCFICHKQL 481

  Fly   330 EGTY---VEDDTYGDMRYD---DSYFTENEDAGNQTAANTSGGGVTATTSKAVVKQQSQ------ 382
            ...|   |..:|:.::||.   .|:.:.::||..:..:....|..:...::|..|:.|:      
  Fly   482 SNQYNLRVHLETHQNVRYACNVCSHVSRSKDALRKHVSYRHPGAPSPCENEARRKRVSKLAATTV 546

  Fly   383 ------NYSESSFVDTSGDQGNTEA---------------------QAATSASATKIPPRK--RG 418
                  :.|.|..| ||||.|...|                     |.|.:|:|..:....  .|
  Fly   547 PTSTPMSMSASHTV-TSGDVGPAPATTLGCSGQEARNPYLFLPNQFQMAAAAAAVAVAESSPASG 610

  Fly   419 RPKTKVEDQTPKPKLLEKLQAATLNEEASEPAVYASTT 456
            :|...:..:.|.....|:......|.||:.....||||
  Fly   611 QPSLDLAHEAPPSIKSEREPPTASNGEATGVEASASTT 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mod(mdg4)NP_788698.1 BTB_POZ_BAB-like 31..115 CDD:349624 34/83 (41%)
FLYWCH 452..512 CDD:461332 4/5 (80%)
CG32121NP_001097599.1 BTB_POZ_BAB-like 54..138 CDD:349624 34/83 (41%)
C2H2 Zn finger 474..494 CDD:275370 2/19 (11%)
C2H2 Zn finger 501..518 CDD:275370 3/16 (19%)

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