DRSC/TRiP Functional Genomics Resources

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Protein Alignment mod(mdg4) and CG32121

DIOPT Version :9

Sequence 1:NP_788698.1 Gene:mod(mdg4) / 49228 FlyBaseID:FBgn0002781 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001097599.1 Gene:CG32121 / 317867 FlyBaseID:FBgn0052121 Length:648 Species:Drosophila melanogaster


Alignment Length:623 Identity:143/623 - (22%)
Similarity:225/623 - (36%) Gaps:173/623 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EQFSLCWNNFNTNLSAGFHESLCRGDLVDVSLAAEGQIVKAHRLVLSVCSPFFRKMFTQMPSNTH 69
            :||.|.|:|..|:|.:.....|.:..|.||:::|||:.::|||:|||.||.||..:|..:.::.|
  Fly    28 QQFCLRWHNHQTSLLSTLPILLDQSHLTDVTISAEGRQLRAHRVVLSACSSFFMDIFRALEASNH 92

  Fly    70 AIVFLNNVSHSALKDLIQFMYCGEVNVKQDALPAFISTAESLQIKGLTD--NDPAP--------- 123
            .::.:...|..|:..|:.|||.|||||.::.:|..::.||:|.||||.|  |:..|         
  Fly    93 PVIIIPGASFGAIVSLLTFMYSGEVNVYEEQIPMLLNLAETLGIKGLADVQNNNLPKTARSGGGS 157

  Fly   124 ------------QPPQESSPPPAAPHVQQQQIPAQRVQRQQPR-ASARYKIETVDDGLGDEKQS- 174
                        :.|...||.| .|.:.....|........|: .||......:.:.||....| 
  Fly   158 YMDTTNEKSSEFERPTTPSPTP-TPTLTPSHTPTPSHSLPLPQLPSAALNTPLLANKLGSVNSSG 221

  Fly   175 --TTQIV------------------IQTTAAPQATIV---QQQQPQQAAQQIQSQQLQTGTTTTA 216
              ||.:.                  ...||..:.|.:   .|||.|.....:|..||:|....:.
  Fly   222 MGTTPLENLFKSLQFYPSLLPQPLNFSQTALNKTTELLAKYQQQCQLYQSGMQEDQLETDCFGSK 286

  Fly   217 TLVSTNK----RSAQRSSL-TPASSS-AGVKRSKTSTSANVMDPLDSTTET--GATTTAQLVPQQ 273
            .|...:.    |..::|.| .|.||| .....||:....:..:|:.:|:..  ...|.|...||.
  Fly   287 RLKGDSPPKELRRLEKSLLKNPKSSSTTNSSSSKSPQECSNPNPIVATSPVTLAPPTMAHFSPQL 351

  Fly   274 ITVQTSVVS----AAEAKLHQQSP------------QQVRQ---------------EEAEYIDLP 307
            ..|:.|..|    ..:.:|:...|            ||..|               |:...:.|.
  Fly   352 PVVKCSSASYPSALGQGQLYSSKPPLYSAAVTPTAAQQAAQMHHHPQPGPSPYISAEDHAKLQLH 416

  Fly   308 ME-------------------LPTKSEPD---YSEDHGDAAGDA--------------------- 329
            :|                   :..||||:   .|.|...:...|                     
  Fly   417 IEQYQREAAAAAAAAAGGMALVSAKSEPNLLSLSADRDKSLATAPIKPPSNSKLYATCFICHKQL 481

  Fly   330 EGTY---VEDDTYGDMRYD---DSYFTENEDAGNQTAANTSGGGVTATTSKAVVKQQSQ------ 382
            ...|   |..:|:.::||.   .|:.:.::||..:..:....|..:...::|..|:.|:      
  Fly   482 SNQYNLRVHLETHQNVRYACNVCSHVSRSKDALRKHVSYRHPGAPSPCENEARRKRVSKLAATTV 546

  Fly   383 ------NYSESSFVDTSGDQGNTEA---------------------QAATSASATKIPPRK--RG 418
                  :.|.|..| ||||.|...|                     |.|.:|:|..:....  .|
  Fly   547 PTSTPMSMSASHTV-TSGDVGPAPATTLGCSGQEARNPYLFLPNQFQMAAAAAAVAVAESSPASG 610

  Fly   419 RPKTKVEDQTPKPKLLEKLQAATLNEEASEPAVYASTT 456
            :|...:..:.|.....|:......|.||:.....||||
  Fly   611 QPSLDLAHEAPPSIKSEREPPTASNGEATGVEASASTT 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mod(mdg4)NP_788698.1 BTB 22..118 CDD:279045 38/95 (40%)
BTB 33..118 CDD:197585 36/84 (43%)
FLYWCH 452..512 CDD:282369 4/5 (80%)
CG32121NP_001097599.1 BTB 48..142 CDD:279045 38/93 (41%)
BTB 56..149 CDD:197585 38/92 (41%)
C2H2 Zn finger 474..494 CDD:275370 2/19 (11%)
C2H2 Zn finger 501..518 CDD:275370 3/16 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.010

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