DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ROR2 and cam-1

DIOPT Version :9

Sequence 1:NP_004551.2 Gene:ROR2 / 4920 HGNCID:10257 Length:943 Species:Homo sapiens
Sequence 2:NP_001021907.1 Gene:cam-1 / 174473 WormBaseID:WBGene00000289 Length:928 Species:Caenorhabditis elegans


Alignment Length:940 Identity:289/940 - (30%)
Similarity:418/940 - (44%) Gaps:221/940 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    37 VLDPNDPLGPLDGQDGPIPTLKGY--FLNFLEPVNNITIVQGQTAILHCKVAGNPPPNVRWLKND 99
            |::|.|..|...|......|..|.  ::.....:.|.|...|......|:..|.||....||||:
 Worm    11 VIEPADDEGLHYGNASMEGTSTGQRPYIRLTSQLRNATKSSGDEVRFKCEALGTPPLKFIWLKNN 75

Human   100 APVVQEPRRIIIRKTEYGSRLRIQDLDTTDTGYYQCVATNGMKTITATGVLFV-----------R 153
            .| |::.:|:.||..|..|||.|..||..|:|||||:.:|...::..|.||.|           :
 Worm    76 GP-VEKTKRVKIRDKENSSRLVITQLDVLDSGYYQCIVSNPAASVNTTSVLRVNNVPDAVKLSQK 139

Human   154 LGPTHSPNHNFQDDY-------------HED--------------------------------GF 173
            .|..||..|...|:|             .||                                |.
 Worm   140 KGSHHSTKHIAFDEYEDYEMMDRGRLPDEEDADLYRVPDSAAGSNYAPVAVSERWLDGIKYRVGD 204

Human   174 CQPYRGIACARFIGNRTIYV--DSLQMQGEIENRITAAFTMIGTSTHLSDQCSQFAIPSFCHFVF 236
            |..|||.||.:::.|:.:.:  :|.:...:|:..:.||...|..:..:|.:|.|.:....||.::
 Worm   205 CVQYRGEACRQYLSNKFVMMTNESREEMYDIDRNLRAAMLFINGAPTISQKCRQLSQAVACHHMY 269

Human   237 PLCDARSRTPKPRELCRDECEVLESDLCRQEYTIARSNPLI--LMRLQLPKCEALPMPESPDAAN 299
            .:|::.|.. :...:|:.:|:|:::|.|..|..:|..:.|:  ..:...|.|..|     ...:|
 Worm   270 KVCESDSNN-QIVSICKHDCDVIQNDECPSELALAAQHELVGDTPKALFPLCSRL-----SSTSN 328

Human   300 CMRI------GIPAERLGR---YHQCYNGSGMDYRGTASTTKSGHQCQPWALQHPHSHHLSSTD- 354
            |:.:      ..|...:.|   .|.||..||..|.||.:.|.||.||.||         :.||. 
 Worm   329 CIPVMSTALQSSPVAEVNRGHLTHWCYVNSGTQYEGTVAQTSSGKQCAPW---------IDSTSR 384

Human   355 ------FPELGGGHAYCRNPGGQMEGPWCFTQNKNVRMELCDVPSCSPRD------------SSK 401
                  ||||.....|||||||:...|||:::... :.|.||||.| |.|            |:|
 Worm   385 DFNVHRFPELMNSKNYCRNPGGKKSRPWCYSKPMG-QEEYCDVPQC-PSDMYPHLNDKKVEGSTK 447

Human   402 MGI------LY-ILVPSIAIPLV---------IACLFFLVCMCRNKQKASASTPQRRQLMASPS- 449
            .|:      |: .|.|::.:.||         :..||...|.||.|:|:..:..|.....::|| 
 Worm   448 GGVSESVTALWDSLDPTMQVALVGGGVFFSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSV 512

Human   450 -------------------------QDMEMPLI--------------NQHKQA------------ 463
                                     ..:||..:              :||.|.            
 Worm   513 INSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLPSAQHLGPPPYPMDQHLQQARRFPSQEPIDD 577

Human   464 ---KLKEISLSAVRFMEELGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 521
               |:.||:.|.:...|::||.:||.|:.|    .||.|.|    .|||:|..:..|....|.:.
 Worm   578 NSYKVFEITPSQLSVREKIGEGQFGVVHSGIYTSGLFAPEP----MAVAVKKCRHDATNAERAQL 638

Human   522 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSP---HSDVGSTDDDRTV 583
            ..|....|...||||:.|:||...|..|..:|.|..||||||.|.:|.|   |...|.|:.:   
 Worm   639 EQEIRAVATFDHPNVIKLIGVCYMDNSLLAVFEYMVHGDLHELLKVRVPPADHDMGGITEAN--- 700

Human   584 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 648
                  .:|:::..|||.|||||:|...||:||||||.||.|...:||:|.||.|..|.:||||:
 Worm   701 ------AEFLYIATQIALGMEYLASMSFVHRDLATRNCLVGDTRTIKIADFGLMRTSYGSDYYKM 759

Human   649 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC 713
            |..|.:|:|||:.|||..|:||..||:||:||.|||::|:|.|||.|.|||.|:|::.||.:|.|
 Worm   760 LHRSWMPVRWMSKEAIEQGRFSEASDVWSFGVTLWEIWSFGRQPYEGASNQQVIELVANRHLLEC 824

Human   714 PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW-------------GNLSNYNSSAQTSGAS 765
            |.:||..:|:||:|||:|...|||.|.:|.|||::|             .|.:..:|.:..:|..
 Worm   825 PHNCPTNIYSLMVECWHENIERRPTFSEIRSRLQSWSLASPAHSILQQHNNRAGSHSGSSGAGRP 889

Human   766 NTTQTSSLS---------TSPVSNVSNARY 786
            .|.|....|         .||:....:|.|
 Worm   890 PTHQRGYPSQKLHRRVEGASPLMKRHDANY 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ROR2NP_004551.2 I-set 64..152 CDD:254352 33/87 (38%)
IGc2 75..141 CDD:197706 28/65 (43%)
CRD_TK_ROR2 170..309 CDD:143577 36/180 (20%)
KR 314..395 CDD:214527 36/87 (41%)
PTKc_Ror2 466..749 CDD:270673 131/289 (45%)
Pkinase_Tyr 473..746 CDD:285015 126/279 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 757..796 9/39 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 850..931
cam-1NP_001021907.1 I-set 39..127 CDD:254352 33/88 (38%)
Ig 55..122 CDD:143165 27/67 (40%)
CRD_TK_ROR_like 203..335 CDD:143568 33/137 (24%)
KR 352..431 CDD:214527 37/89 (42%)
STYKc 590..857 CDD:214568 126/279 (45%)
PTKc 594..858 CDD:270623 127/276 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 247 1.000 Domainoid score I1322
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55831
Inparanoid 1 1.050 404 1.000 Inparanoid score I1213
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48666
OrthoDB 1 1.010 - - D222671at33208
OrthoFinder 1 1.000 - - FOG0003730
OrthoInspector 1 1.000 - - otm15557
orthoMCL 1 0.900 - - OOG6_105406
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3136
SonicParanoid 1 1.000 - - X2586
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.910

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