DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phb1 and nphs2

DIOPT Version :10

Sequence 1:NP_476607.2 Gene:Phb1 / 49168 FlyBaseID:FBgn0002031 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_001018155.2 Gene:nphs2 / 557914 ZFINID:ZDB-GENE-051102-2 Length:391 Species:Danio rerio


Alignment Length:257 Identity:60/257 - (23%)
Similarity:100/257 - (38%) Gaps:61/257 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RAVIFDRFTGIKENVVGEGTHFFIPWVQRPIIFDIRSQPRNVP---VITGSKDLQNVNITLRILY 96
            |||.|.....:|:...|.|..|::|::....|.|||.|...:|   |:|  |||....:|....|
Zfish   145 RAVKFRLGHLLKKRPRGPGLMFYLPFLDVCHIVDIRLQILKIPPHMVVT--KDLVCTEVTAVCYY 207

  Fly    97 R------------PIPDQLPKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQREMVSQR 149
            |            .|||                |:.::....::.::|.....:::..|:.::|.
Zfish   208 RIENVSVCYSSFASIPD----------------VMQALTQVSVREILAHHAFNDILLDRKRIAQE 256

  Fly   150 VSQELTVRAKQFGFILDDISLTHLTFGREFTLAVEMKQVAQQEAEKARFVVEKAEQQKLASIISA 214
            :...|.....::|..::...:      .|..|..|::.....|||        |.:|....:|:|
Zfish   257 IQVTLDSGTCRWGIKVEKAEI------EEINLPPELQHNFAVEAE--------ARRQAQVKVIAA 307

  Fly   215 EGDAEAAGLLAKSF-GEAGDGLVELRRIEAAEDIAYQLSRSRGVAYLPSGQ-STLLNLPSTI 274
            ||:..|...|..|. ..:|..||...|:       .||..|     |.|.| :.:||:|..:
Zfish   308 EGEKAACEALKASVESVSGSPLVMHLRL-------LQLLHS-----LRSEQPAVVLNIPPDV 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phb1NP_476607.2 SPFH_prohibitin 27..221 CDD:259799 44/200 (22%)
nphs2NP_001018155.2 SPFH_like 134..356 CDD:473137 60/254 (24%)

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