DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cc and phb1

DIOPT Version :9

Sequence 1:NP_001163012.2 Gene:l(2)37Cc / 49168 FlyBaseID:FBgn0002031 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_594713.1 Gene:phb1 / 2542354 PomBaseID:SPAC1782.06c Length:282 Species:Schizosaccharomyces pombe


Alignment Length:279 Identity:143/279 - (51%)
Similarity:208/279 - (74%) Gaps:11/279 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AQFFNRIGQMGLGVAVLGGVVNSALYNVEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRPIIF 67
            |....|:.:..:.:.:...::.|::|:|.||.|||:|||.:|:::.||.|||||.|||:|:.|::
pombe     2 AVVLERVARYAIPIGIGFTLLQSSIYDVPGGKRAVLFDRLSGVQKQVVQEGTHFLIPWLQKAIVY 66

  Fly    68 DIRSQPRNVPVITGSKDLQNVNITLRILYRPIPDQLPKIYTILGQDYDERVLPSIAPEVLKAVVA 132
            |:|::|||:...|||||||.|::|||:|:||....||:||..||.||||||||||..|:||:|||
pombe    67 DVRTRPRNIATTTGSKDLQMVSLTLRVLHRPEVGMLPQIYQNLGLDYDERVLPSIGNEILKSVVA 131

  Fly   133 QFDAGELITQREMVSQRVSQELTVRAKQFGFILDDISLTHLTFGREFTLAVEMKQVAQQEAEKAR 197
            ||||.|||||||:||.::.|||..||.:||..|:|:|:||:|||:|||.|||.||:||||||:||
pombe   132 QFDAAELITQREVVSAKIRQELVQRATEFGIRLEDVSITHMTFGKEFTKAVERKQIAQQEAERAR 196

  Fly   198 FVVEKAEQQKLASIISAEGDAEAAGLLAKSFGEAGDGLVELRRIEAAEDIAYQL-SRSRGVAYLP 261
            |:||::||::.|::|.|||:||||.:::|:..:||..|:::||:|.::::|..| ::...|.|||
pombe   197 FLVEQSEQERQANVIRAEGEAEAADIVSKALDKAGGALIQIRRLETSKEVATALANKGAQVTYLP 261

  Fly   262 ----------SGQSTLLNL 270
                      ||...|||:
pombe   262 FGAGSNAQSSSGSGLLLNV 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CcNP_001163012.2 SPFH_prohibitin 27..221 CDD:259799 120/193 (62%)
phb1NP_594713.1 PHB 24..186 CDD:214581 99/161 (61%)
SPFH_prohibitin 26..220 CDD:259799 120/193 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 234 1.000 Domainoid score I487
eggNOG 1 0.900 - - E1_COG0330
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1980
Inparanoid 1 1.050 290 1.000 Inparanoid score I635
OMA 1 1.010 - - QHG63567
OrthoFinder 1 1.000 - - FOG0003661
OrthoInspector 1 1.000 - - oto101972
orthoMCL 1 0.900 - - OOG6_101926
Panther 1 1.100 - - LDO PTHR23222
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R920
SonicParanoid 1 1.000 - - X2109
TreeFam 1 0.960 - -
1413.860

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