DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cc and sto-3

DIOPT Version :9

Sequence 1:NP_001163012.2 Gene:l(2)37Cc / 49168 FlyBaseID:FBgn0002031 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_509941.1 Gene:sto-3 / 191966 WormBaseID:WBGene00006065 Length:267 Species:Caenorhabditis elegans


Alignment Length:223 Identity:45/223 - (20%)
Similarity:93/223 - (41%) Gaps:33/223 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RAVIFDRFTGIKENVVGEGTHFFIPWVQRPIIFDIRSQPRNVP---VITGSKDLQNVNITLRILY 96
            |.|||......::|..|.|....:|::......|:|....:||   ::|  :|...:.:...:.|
 Worm    47 RMVIFRLGRLWQDNPRGPGIVLVLPFIDSHKTVDLRVMSYDVPTQEMLT--RDSVTIGVDAAVYY 109

  Fly    97 RPIPDQLPKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQREMVSQRVSQELTVRAKQF 161
            | ..|.:..:..:.......|   .:|...|:.|:......||:|.|..::.:|...|......:
 Worm   110 R-TSDPIASLARVNDAHMSTR---QLAQSSLRNVLGTRSLAELMTDRHGIAVQVKYILDSATLFW 170

  Fly   162 GFILDDISLTHLTFGREFTLAVEMKQVAQQEAEKARFVVEKAEQQKLASIISAEGDAEAAGLLAK 226
            |..::.:.:..:...||...|:..:..||:|::              |.:::|:|:.:|    :.
 Worm   171 GIHVERVEIKDIRLPREMCRAMAAEAEAQRESD--------------AKVVTAQGELDA----SM 217

  Fly   227 SFGEAGDGL------VELRRIEAAEDIA 248
            :|.:|.|.|      ::||.::....|:
 Worm   218 AFQKAADELAGSPTALQLRYLQTLVKIS 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CcNP_001163012.2 SPFH_prohibitin 27..221 CDD:259799 37/188 (20%)
sto-3NP_509941.1 PHB 37..196 CDD:214581 31/154 (20%)
SPFH_like 62..261 CDD:302763 40/208 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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