| Sequence 1: | XP_016877743.1 | Gene: | NTRK3 / 4916 | HGNCID: | 8033 | Length: | 850 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001257585.1 | Gene: | Ntrk3 / 29613 | RGDID: | 3214 | Length: | 864 | Species: | Rattus norvegicus |
| Alignment Length: | 864 | Identity: | 823/864 - (95%) |
|---|---|---|---|
| Similarity: | 838/864 - (96%) | Gaps: | 14/864 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MDVSLCPAKCSFWRIFLLGSVWLDYVGSVLACPANCVCSKTEINCRRPDDGNLFPLLEGQDSGNS 65
Human 66 NGNASINITDISRNITSIHIENWRSLHTLNAVDMELYTGLQKLTIKNSGLRSIQPRAFAKNPHLR 130
Human 131 YINLSSNRLTTLSWQLFQTLSLRELQLEQNFFNCSCDIRWMQLWQEQGEAKLNSQNLYCINADGS 195
Human 196 QLPLFRMNISQCDLPEISVSHVNLTVREGDNAVITCNGSGSPLPDVDWIVTGLQSINTHQTNLNW 260
Human 261 TNVHAINLTLVNVTSEDNGFTLTCIAENVVGMSNASVALTVYYPPRVVSLEEPELRLEHCIEFVV 325
Human 326 RGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQT 390
Human 391 INGHFLKEPFPESTDNFILFDEVSPTPPITVTHKPEEDTFGVSIAVGLAAFACVLLVVLFVMINK 455
Human 456 YGRRSKFGMKGPVAVISGEEDSASPLHHINHGITTPSSLDAGPDTVVIGMTRIPVIENPQYFRQG 520
Human 521 HNCHKPDTYVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDF 585
Human 586 QREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 650
Human 651 LGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYREGPC 715
Human 716 QKGPFSVVWQRQRLAATAAST--------------VGGHTMLPIRWMPPESIMYRKFTTESDVWS 766
Human 767 FGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEI 831
Human 832 YKILHALGKATPIYLDILG 850 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| NTRK3 | XP_016877743.1 | LRR_8 | 103..160 | CDD:290566 | 54/56 (96%) |
| leucine-rich repeat | 105..128 | CDD:275378 | 21/22 (95%) | ||
| leucine-rich repeat | 129..151 | CDD:275378 | 21/21 (100%) | ||
| leucine-rich repeat | 152..164 | CDD:275378 | 10/11 (91%) | ||
| TPKR_C2 | 163..208 | CDD:293525 | 40/44 (91%) | ||
| Ig_TrkABC_d4 | 211..301 | CDD:143173 | 89/89 (100%) | ||
| IG_like | 218..301 | CDD:214653 | 82/82 (100%) | ||
| Ig_TrKABC_d5 | 319..396 | CDD:143172 | 70/76 (92%) | ||
| PTKc_TrkC | 532..843 | CDD:270676 | 306/324 (94%) | ||
| TyrKc | 538..835 | CDD:197581 | 292/310 (94%) | ||
| Ntrk3 | NP_001257585.1 | LRRNT | 31..>51 | CDD:396168 | 19/19 (100%) |
| LRR_8 | 103..160 | CDD:404697 | 54/56 (96%) | ||
| LRR 1 | 104..125 | 19/20 (95%) | |||
| leucine-rich repeat | 105..128 | CDD:275378 | 21/22 (95%) | ||
| LRR 2 | 128..149 | 20/20 (100%) | |||
| leucine-rich repeat | 129..151 | CDD:275378 | 21/21 (100%) | ||
| leucine-rich repeat | 152..164 | CDD:275378 | 10/11 (91%) | ||
| TPKR_C2 | 163..208 | CDD:407151 | 40/44 (91%) | ||
| ig | 214..299 | CDD:395002 | 84/84 (100%) | ||
| Ig strand A' | 218..221 | CDD:409353 | 2/2 (100%) | ||
| Ig strand B | 226..234 | CDD:409353 | 7/7 (100%) | ||
| Ig strand C | 240..244 | CDD:409353 | 3/3 (100%) | ||
| Ig strand D | 254..262 | CDD:409353 | 7/7 (100%) | ||
| Ig strand E | 266..271 | CDD:409353 | 4/4 (100%) | ||
| Ig strand F | 279..288 | CDD:409353 | 8/8 (100%) | ||
| Ig strand G | 291..301 | CDD:409353 | 9/9 (100%) | ||
| IgI_TrKABC_d5 | 304..396 | CDD:409360 | 83/91 (91%) | ||
| Ig strand B | 319..323 | CDD:409360 | 3/3 (100%) | ||
| Ig strand C | 332..336 | CDD:409360 | 3/3 (100%) | ||
| Ig strand E | 361..365 | CDD:409360 | 3/3 (100%) | ||
| Ig strand F | 375..380 | CDD:409360 | 4/4 (100%) | ||
| Ig strand G | 388..391 | CDD:409360 | 2/2 (100%) | ||
| PTKc_TrkC | 532..857 | CDD:270676 | 306/324 (94%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83692378 | |
| Domainoid | 1 | 1.000 | 290 | 1.000 | Domainoid score | I16065 |
| eggNOG | 1 | 0.900 | - | - | E2759_KOG1026 | |
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H49183 | |
| Inparanoid | 1 | 1.050 | 1680 | 1.000 | Inparanoid score | I2186 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG43798 | |
| OrthoDB | 1 | 1.010 | - | - | D12107at314146 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0009232 | |
| OrthoInspector | 1 | 1.000 | - | - | oto134978 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_105224 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR24416 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X6973 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 17 | 17.310 | |||||