DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment epsilonTry and Tmprss4

DIOPT Version :10

Sequence 1:NP_525112.1 Gene:epsilonTry / 49080 FlyBaseID:FBgn0010425 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:228 Identity:89/228 - (39%)
Similarity:128/228 - (56%) Gaps:10/228 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RIVGGYETSIDAHPYQVSLQRYGSHFCGGSIYSHDIVITAAHCLQS-IEAKDLKIRVGSTYWRSG 93
            |:|||.|.|.|:.|:|||:|....|.|||||..|..::|||||.:. ::....|:|.||....:.
  Rat   245 RVVGGVEASADSWPWQVSIQYNKQHVCGGSILDHHWILTAAHCFRKYLDVSSWKVRAGSNKLGNS 309

  Fly    94 GSVHSVRSFRNHEGYNSRTMVNDIAIIRIESDLSFRSSIREIRIADSNPREGAT--AVVSGWGTT 156
            .|:...:.| ..|....:....|||:::::..|:|..|:|.|.:..|:.....|  ..|.|||.|
  Rat   310 PSLPVAKIF-IAEPNPLQPKEKDIALVKLKMPLTFSGSVRPICLPFSDEELIPTMPVWVIGWGFT 373

  Fly   157 ESGGSTIPDHLLAVDLEIIDVSRCRSDEFGYGKKIKDTMLCAYAPH--KDACQGDSGGPLV---S 216
            |..|..:.|.||...:::||.:||.::: .|..::...||||..|.  ||.|||||||||:   .
  Rat   374 EENGGKMSDTLLQASVQVIDSARCNAED-AYQGEVTAGMLCAGTPQGGKDTCQGDSGGPLMYHYD 437

  Fly   217 GDRLVGVVSWGYGCGDVRYPGVYADVAHFHEWI 249
            ..::||:||||||||....||||..|..:.:||
  Rat   438 KWQVVGIVSWGYGCGSPSTPGVYTKVTAYLDWI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
epsilonTryNP_525112.1 Tryp_SPc 30..249 CDD:214473 87/226 (38%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060
SRCR_2 149..238 CDD:470597
Tryp_SPc 245..470 CDD:214473 87/226 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.